Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC017002.4-201ENST00000604721 1525 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 Z95331.1-201ENST00000623075 23112 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 SNORD51.1-201ENST00000365405 77 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 RNU6-146P-201ENST00000384602 108 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 CHEK2P5-201ENST00000423877 246 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC019185.1-201ENST00000442718 389 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC245517.2-201ENST00000442890 346 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 RN7SL51P-201ENST00000468230 285 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AP000797.2-201ENST00000475768 606 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 NPM1P29-201ENST00000483112 803 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 CDH12P2-201ENST00000504393 298 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC106872.4-201ENST00000510050 523 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC093770.1-201ENST00000511559 571 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 RNU6-941P-201ENST00000516346 108 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC022884.3-201ENST00000579571 248 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC018809.2-201ENST00000602436 3823 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AC010245.2-201ENST00000606908 1167 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AL355802.4-201ENST00000607635 548 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 uc_338.7-201ENST00000621834 124 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AP000720.1-201ENST00000625091 483 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 OR5AC4P-202ENST00000642086 985 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.6
NUP54Q7Z3B4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
NUP54Q7Z3B4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUP54Q7Z3B4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
NUP54Q7Z3B4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC096656.1-201ENST00000623826 1364 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 CASC19-260ENST00000641828 2001 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC235565.1-201ENST00000456962 1325 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 RNU6-31P-201ENST00000384388 108 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC092642.1-201ENST00000392417 425 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC073464.3-201ENST00000422564 712 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 RPL7P56-201ENST00000429441 717 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 NDUFA5P10-201ENST00000432147 357 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 TMX2P1-201ENST00000436507 708 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL390119.1-201ENST00000440329 312 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AZGP1P2-201ENST00000454506 345 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 APOOP2-201ENST00000461561 539 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 ABCC13-202ENST00000463099 3842 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC009237.13-201ENST00000603193 276 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL049844.2-201ENST00000604280 628 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC007423.1-201ENST00000605009 627 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC010200.2-201ENST00000605098 235 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AC005972.3-201ENST00000606304 481 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 AL049767.1-202ENST00000637826 242 ntBASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP54Q7Z3B4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms