Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 RPS4XP1-201ENST00000482189 787 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC027308.1-201ENST00000517993 110 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 HMGB1P40-201ENST00000525121 540 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 LSM3P2-201ENST00000551246 273 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AP005403.1-201ENST00000579720 229 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 KATNBL1P5-201ENST00000605015 517 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC016769.4-201ENST00000616893 535 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AL356274.1-201ENST00000617064 410 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC074101.1-201ENST00000637861 241 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC083843.2-201ENST00000568248 6253 ntBASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNX30Q5VWJ9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 U3.2-201ENST00000362981 210 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC108075.1-201ENST00000424692 529 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC009784.1-201ENST00000426484 460 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AL390879.2-203ENST00000426943 1121 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 BRWD1P3-201ENST00000428816 390 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 NDUFA5P10-201ENST00000432147 357 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 GSTM5P1-201ENST00000434751 660 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC004825.1-201ENST00000555068 586 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC233266.2-201ENST00000567067 528 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC016180.1-201ENST00000567945 403 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC005341.1-201ENST00000571086 708 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 MIR6719-201ENST00000622428 87 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC021766.1-201ENST00000624404 741 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC073869.8-201ENST00000641806 335 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC104964.3-201ENST00000606115 2860 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 AC007382.1-201ENST00000624376 2618 ntBASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNX30Q5VWJ9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 SNORA67-201ENST00000384423 137 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 DBIP1-201ENST00000401435 260 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AL034374.1-201ENST00000406329 351 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AL139148.1-201ENST00000427122 680 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AC245047.2-201ENST00000441060 530 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 PSAT1P4-201ENST00000466500 526 ntBASIC5.65□□□□□ -1.5
SNX30Q5VWJ9 AC072052.1-201ENST00000496556 306 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms