Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC38Q502W7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC38Q502W7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 OR4F13P-202ENST00000560066 2054 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC083899.1-201ENST00000454465 3819 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL121886.1-201ENST00000358609 435 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 RNU6-1000P-201ENST00000391066 106 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC005042.1-201ENST00000393397 800 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL355615.1-201ENST00000406187 641 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC002524.1-201ENST00000411687 547 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 Z68694.1-201ENST00000413929 841 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 VN1R37P-201ENST00000419096 748 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 MTND2P9-201ENST00000422293 931 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC108471.1-201ENST00000513977 287 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC104115.2-201ENST00000523026 687 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AP003717.3-201ENST00000544832 1180 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL049830.4-201ENST00000555149 351 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 NDUFA5P11-201ENST00000567995 343 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC022884.3-201ENST00000579571 248 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC011458.1-201ENST00000604034 617 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC105148.1-201ENST00000604961 409 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL162574.1-201ENST00000615702 950 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC007275.1-201ENST00000621243 671 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC009269.6-201ENST00000621778 588 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC132825.7-201ENST00000638744 335 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 SAMMSON-227ENST00000642114 1199 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 MTCO1P18-201ENST00000455518 1419 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
CCDC38Q502W7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 AC093775.1-201ENST00000624154 1868 ntBASIC5.79□□□□□ -1.48
CCDC38Q502W7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC38Q502W7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC38Q502W7 AP000357.1-201ENST00000409926 1165 ntBASIC5.78□□□□□ -1.48
CCDC38Q502W7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 HYALP1-201ENST00000417674 1279 ntBASIC5.78□□□□□ -1.48
CCDC38Q502W7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC38Q502W7 OR5M12P-201ENST00000423388 929 ntBASIC5.78□□□□□ -1.48
CCDC38Q502W7 RPL12P11-201ENST00000439970 501 ntBASIC5.78□□□□□ -1.48
CCDC38Q502W7 AL353093.1-201ENST00000441292 436 ntBASIC5.78□□□□□ -1.48
CCDC38Q502W7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms