Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 RPS3AP2-201ENST00000407190 754 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC016769.2-201ENST00000414815 475 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 RPS24P7-201ENST00000416921 246 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 Z75741.2-201ENST00000417272 1167 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 BMS1P13-201ENST00000417301 885 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL513325.1-201ENST00000417716 1034 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 TUBB4BP6-201ENST00000437576 479 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AP000936.3-201ENST00000438127 255 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL929288.2-201ENST00000446368 407 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC005002.1-201ENST00000447458 540 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 YWHAEP1-201ENST00000453697 763 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 GEMIN2P1-201ENST00000454246 752 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 NAP1L1P3-201ENST00000462291 880 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC124945.1-201ENST00000485133 188 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 BOLA3P3-201ENST00000505182 232 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 RNA5SP400-201ENST00000517155 111 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 MTCO3P15-201ENST00000526563 574 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 OR5AM1P-201ENST00000532136 1032 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 PCNAP4-201ENST00000532690 730 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 OR4U1P-201ENST00000554958 912 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC016839.1-201ENST00000578162 867 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 MIR132-201ENST00000591554 101 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC245036.5-201ENST00000596330 847 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 VN1R88P-201ENST00000596787 292 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL136131.3-201ENST00000607600 188 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 MIR6826-201ENST00000617808 98 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC025470.1-201ENST00000510053 2032 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AP005432.1-201ENST00000580891 3485 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 AC027088.4-201ENST00000611559 1947 ntBASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.87□□□□□ -1.31
CCDC144BQ3MJ40 GNL2P1-201ENST00000451274 2190 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC096656.1-201ENST00000623826 1364 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RNU4-92P-201ENST00000363783 136 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RN7SKP293-201ENST00000411389 296 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 SDHDP6-201ENST00000414693 480 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AL121776.1-201ENST00000429337 372 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RPS3AP38-201ENST00000435889 763 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 SUMO2P3-201ENST00000438311 288 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AL512593.1-201ENST00000444758 779 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AL136038.1-201ENST00000497246 351 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms