Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.47□□□□□ -1.69
VBP1P61758 AC087477.6-201ENST00000559595 843 ntBASIC4.47□□□□□ -1.69
VBP1P61758 MT1CP-201ENST00000567054 174 ntBASIC4.47□□□□□ -1.69
VBP1P61758 RN7SL66P-201ENST00000582099 264 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.47□□□□□ -1.69
VBP1P61758 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.47□□□□□ -1.69
VBP1P61758 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.47□□□□□ -1.69
VBP1P61758 AC060766.1-201ENST00000590824 627 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.47□□□□□ -1.69
VBP1P61758 AC124916.2-201ENST00000604416 224 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AL591222.2-201ENST00000604443 754 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AL139286.1-201ENST00000604465 483 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AL031601.1-201ENST00000605702 394 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.47□□□□□ -1.69
VBP1P61758 AC091979.2-201ENST00000607514 214 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AC017076.1-201ENST00000607613 578 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AP005432.2-201ENST00000608162 586 ntBASIC4.47□□□□□ -1.69
VBP1P61758 U91328.4-201ENST00000608919 517 ntBASIC4.47□□□□□ -1.69
VBP1P61758 MIR6823-201ENST00000622118 61 ntBASIC4.47□□□□□ -1.69
VBP1P61758 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.47□□□□□ -1.69
VBP1P61758 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VBP1P61758 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VBP1P61758 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VBP1P61758 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.47□□□□□ -1.69
VBP1P61758 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VBP1P61758 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
VBP1P61758 IRF5P1-201ENST00000504852 2164 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AL133412.1-201ENST00000380194 2992 ntBASIC4.47□□□□□ -1.69
VBP1P61758 AC235565.1-201ENST00000456962 1325 ntBASIC4.46□□□□□ -1.69
VBP1P61758 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.69
VBP1P61758 YES1P1-201ENST00000418510 1628 ntBASIC4.46□□□□□ -1.69
VBP1P61758 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
VBP1P61758 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 PHKBP1-201ENST00000450951 1951 ntBASIC4.46□□□□□ -1.7
VBP1P61758 GCNT6-201ENST00000379591 934 ntBASIC4.46□□□□□ -1.7
VBP1P61758 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
VBP1P61758 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 OR7E101P-201ENST00000400428 513 ntBASIC4.46□□□□□ -1.7
VBP1P61758 HMGB1P20-201ENST00000402555 677 ntBASIC4.46□□□□□ -1.7
VBP1P61758 ZNF37CP-201ENST00000406795 241 ntBASIC4.46□□□□□ -1.7
VBP1P61758 MIR1203-201ENST00000408812 85 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AL450992.3-201ENST00000413192 568 ntBASIC4.46□□□□□ -1.7
VBP1P61758 RPL21P108-201ENST00000413857 481 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.46□□□□□ -1.7
VBP1P61758 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.46□□□□□ -1.7
VBP1P61758 OR2X1P-201ENST00000421144 687 ntBASIC4.46□□□□□ -1.7
VBP1P61758 SEC63P1-201ENST00000425785 1258 ntBASIC4.46□□□□□ -1.7
VBP1P61758 NPM1P48-201ENST00000436002 853 ntBASIC4.46□□□□□ -1.7
VBP1P61758 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 PA2G4P1-201ENST00000442248 1197 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.46□□□□□ -1.7
VBP1P61758 TDGF1P1-201ENST00000445734 527 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AL035551.1-201ENST00000446931 348 ntBASIC4.46□□□□□ -1.7
VBP1P61758 RPL7P40-201ENST00000481703 745 ntBASIC4.46□□□□□ -1.7
VBP1P61758 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 AC122714.1-201ENST00000502510 459 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.46□□□□□ -1.7
VBP1P61758 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 AC078878.1-201ENST00000539832 958 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.46□□□□□ -1.7
VBP1P61758 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.46□□□□□ -1.7
VBP1P61758 AC079075.1-201ENST00000559543 878 ntBASIC4.46□□□□□ -1.7
VBP1P61758 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.46□□□□□ -1.7
VBP1P61758 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.46□□□□□ -1.7
VBP1P61758 AC002519.2-203ENST00000567043 837 ntBASIC4.46□□□□□ -1.7
VBP1P61758 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 RPL26P30-202ENST00000602923 645 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AC012511.1-201ENST00000608140 449 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.46□□□□□ -1.7
VBP1P61758 AC026368.1-201ENST00000614934 690 ntBASIC4.46□□□□□ -1.7
VBP1P61758 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.46□□□□□ -1.7
VBP1P61758 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
VBP1P61758 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
VBP1P61758 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
VBP1P61758 BX005019.1-201ENST00000561881 1810 ntBASIC4.46□□□□□ -1.7
VBP1P61758 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.46□□□□□ -1.7
VBP1P61758 AP000756.2-201ENST00000624168 2567 ntBASIC4.46□□□□□ -1.7
VBP1P61758 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VBP1P61758 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VBP1P61758 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.45□□□□□ -1.7
VBP1P61758 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VBP1P61758 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VBP1P61758 AC017104.4-201ENST00000636283 1592 ntBASIC4.45□□□□□ -1.7
VBP1P61758 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VBP1P61758 NXF4-202ENST00000416098 1465 ntBASIC4.45□□□□□ -1.7
VBP1P61758 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VBP1P61758 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.45□□□□□ -1.7
VBP1P61758 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
VBP1P61758 RNA5SP394-201ENST00000364216 119 ntBASIC4.45□□□□□ -1.7
VBP1P61758 RNU4-2-201ENST00000365668 141 ntBASIC4.45□□□□□ -1.7
VBP1P61758 MEAF6P1-201ENST00000416092 327 ntBASIC4.45□□□□□ -1.7
VBP1P61758 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.45□□□□□ -1.7
VBP1P61758 RPSAP32-201ENST00000432681 526 ntBASIC4.45□□□□□ -1.7
VBP1P61758 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms