Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNA5SP46-201ENST00000362370 120 ntBASIC6.75□□□□□ -1.33
RTP1P59025 SNORA64.1-201ENST00000362600 132 ntBASIC6.75□□□□□ -1.33
RTP1P59025 SNORD56.4-201ENST00000363883 71 ntBASIC6.75□□□□□ -1.33
RTP1P59025 RNU6-304P-201ENST00000364855 107 ntBASIC6.75□□□□□ -1.33
RTP1P59025 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 Y_RNA.559-201ENST00000384686 107 ntBASIC6.75□□□□□ -1.33
RTP1P59025 ATF1P1-201ENST00000406040 927 ntBASIC6.75□□□□□ -1.33
RTP1P59025 RN7SKP151-201ENST00000410230 316 ntBASIC6.75□□□□□ -1.33
RTP1P59025 Y_RNA.625-201ENST00000411256 107 ntBASIC6.75□□□□□ -1.33
RTP1P59025 OR2AT2P-201ENST00000413438 905 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 MTND1P4-201ENST00000435196 415 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 PTGES3P1-201ENST00000439531 483 ntBASIC6.75□□□□□ -1.33
RTP1P59025 RPL34P26-201ENST00000445636 354 ntBASIC6.75□□□□□ -1.33
RTP1P59025 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 AC231760.1-201ENST00000498002 260 ntBASIC6.75□□□□□ -1.33
RTP1P59025 OR51A1P-201ENST00000511110 946 ntBASIC6.75□□□□□ -1.33
RTP1P59025 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 MTCYBP41-201ENST00000528913 1123 ntBASIC6.75□□□□□ -1.33
RTP1P59025 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 AC006530.1-201ENST00000555980 571 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.75□□□□□ -1.33
RTP1P59025 AC095057.3-201ENST00000567102 1157 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AGGF1P4-201ENST00000568249 801 ntBASIC6.75□□□□□ -1.33
RTP1P59025 MIR4789-201ENST00000577469 82 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.75□□□□□ -1.33
RTP1P59025 AL020997.3-201ENST00000602843 359 ntBASIC6.75□□□□□ -1.33
RTP1P59025 RMST_10.1-201ENST00000616309 154 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AL445670.1-201ENST00000618889 801 ntBASIC6.75□□□□□ -1.33
RTP1P59025 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 AC091931.1-201ENST00000623488 728 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AC079248.2-201ENST00000623779 326 ntBASIC6.75□□□□□ -1.33
RTP1P59025 AL357562.1-201ENST00000624911 609 ntBASIC6.75□□□□□ -1.33
RTP1P59025 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RTP1P59025 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.75□□□□□ -1.33
RTP1P59025 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 AC092104.1-201ENST00000497346 1441 ntBASIC6.75□□□□□ -1.33
RTP1P59025 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RTP1P59025 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.75□□□□□ -1.33
RTP1P59025 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.74□□□□□ -1.33
RTP1P59025 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 AC012254.3-201ENST00000591183 2117 ntBASIC6.74□□□□□ -1.33
RTP1P59025 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.74□□□□□ -1.33
RTP1P59025 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
RTP1P59025 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 AC024587.1-201ENST00000505925 2157 ntBASIC6.74□□□□□ -1.33
RTP1P59025 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 AC009779.8-201ENST00000641684 4384 ntBASIC6.74□□□□□ -1.33
RTP1P59025 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.74□□□□□ -1.33
RTP1P59025 AP000534.2-201ENST00000412729 568 ntBASIC6.74□□□□□ -1.33
RTP1P59025 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.74□□□□□ -1.33
RTP1P59025 NIPA2P1-201ENST00000426223 976 ntBASIC6.74□□□□□ -1.33
RTP1P59025 ELOCP8-201ENST00000439309 332 ntBASIC6.74□□□□□ -1.33
RTP1P59025 ELOCP15-201ENST00000442090 332 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC234781.3-201ENST00000452540 973 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 NDUFA12P1-201ENST00000455914 406 ntBASIC6.74□□□□□ -1.33
RTP1P59025 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.74□□□□□ -1.33
RTP1P59025 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.74□□□□□ -1.33
RTP1P59025 AC138866.2-201ENST00000508650 584 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 RNU6-319P-201ENST00000516025 108 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.74□□□□□ -1.33
RTP1P59025 GARSP1-201ENST00000570895 719 ntBASIC6.74□□□□□ -1.33
RTP1P59025 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RTP1P59025 RNU4ATAC-201ENST00000580972 127 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC119403.2-201ENST00000590960 598 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC093765.1-201ENST00000603758 881 ntBASIC6.74□□□□□ -1.33
RTP1P59025 RN7SKP299-201ENST00000606679 301 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AP003392.5-201ENST00000607857 415 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AP001596.2-201ENST00000608410 312 ntBASIC6.74□□□□□ -1.33
RTP1P59025 AC037198.3-201ENST00000616754 526 ntBASIC6.74□□□□□ -1.33
RTP1P59025 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 AC092451.3-201ENST00000625067 1343 ntBASIC6.74□□□□□ -1.33
RTP1P59025 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RTP1P59025 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.73□□□□□ -1.33
RTP1P59025 HSPD1P11-201ENST00000508643 1702 ntBASIC6.73□□□□□ -1.33
RTP1P59025 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.73□□□□□ -1.33
RTP1P59025 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms