Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC092681.1-201ENST00000297369 291 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLDN6P56747 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN6P56747 U3.28-201ENST00000391249 210 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN6P56747 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CLDN6P56747 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CLDN6P56747 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 BX119904.3-201ENST00000428194 957 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 AL513533.1-201ENST00000453728 415 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 RPL12P20-201ENST00000475538 479 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 RPSAP51-201ENST00000497462 645 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC034205.1-201ENST00000520621 638 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
CLDN6P56747 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 AL445423.1-201ENST00000609941 536 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC016717.3-201ENST00000624730 554 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AP003400.3-201ENST00000624904 346 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 OR52H1-202ENST00000641796 1061 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN6P56747 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLDN6P56747 AC004158.1-201ENST00000564508 4319 ntBASIC4.9□□□□□ -1.63
CLDN6P56747 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN6P56747 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN6P56747 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN6P56747 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN6P56747 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 AC093909.5-201ENST00000621839 1799 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN6P56747 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 AC007068.1-201ENST00000396690 844 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 RNA5SP113-201ENST00000410486 84 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 AC004690.1-201ENST00000418216 328 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 RPL12P43-201ENST00000420608 499 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 KNOP1P3-201ENST00000446933 426 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 snoU13.1-201ENST00000459157 104 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 RN7SL188P-201ENST00000469842 285 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.89□□□□□ -1.63
CLDN6P56747 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN6P56747 AL359715.3-201ENST00000569267 2123 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 AL162431.4-201ENST00000604674 411 ntBASIC4.89□□□□□ -1.63
CLDN6P56747 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLDN6P56747 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN6P56747 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN6P56747 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLDN6P56747 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN6P56747 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN6P56747 SDAD1P1-202ENST00000524156 2051 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AL034549.2-201ENST00000618285 3373 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 MTCO1P46-201ENST00000451639 1491 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 NAMPTP1-201ENST00000440465 2514 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 CDC27P2-201ENST00000425026 1922 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN6P56747 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN6P56747 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms