Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 AL391261.1-201ENST00000555712 1479 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL355488.2-201ENST00000609909 2850 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC012020.1-201ENST00000624541 1728 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 OR10J6P-201ENST00000289731 930 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 Y_RNA.41-201ENST00000362646 102 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RNU1-84P-201ENST00000365447 164 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RNA5SP88-201ENST00000365560 109 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 SNORD116-23-201ENST00000384645 92 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AL391419.1-201ENST00000398901 1275 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 EI24P3-201ENST00000399046 1062 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL132875.1-201ENST00000403623 949 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RPL5P20-201ENST00000403848 896 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RN7SKP129-201ENST00000410288 299 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RN7SKP221-201ENST00000410420 301 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RN7SKP33-201ENST00000410942 340 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.92□□□□□ -1.46
GFRA1P56159 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC062016.2-201ENST00000420950 676 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 LINC00328-2P-201ENST00000436585 219 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL031663.1-201ENST00000437445 219 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 CBX1P4-201ENST00000439415 457 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC234771.2-201ENST00000445718 597 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RBMY3AP-201ENST00000449381 1145 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 TPT1P7-201ENST00000458300 517 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL603882.1-201ENST00000463059 681 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 RPL23AP12-201ENST00000467573 473 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC090013.1-201ENST00000485147 480 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AL117692.1-201ENST00000494283 713 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 H3F3AP3-201ENST00000497682 407 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC083906.1-201ENST00000509298 406 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC239860.2-201ENST00000525886 270 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 HMGB1P42-201ENST00000532126 553 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC016957.1-201ENST00000534895 309 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AL133241.1-201ENST00000556832 487 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 RN7SL208P-201ENST00000577964 296 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 SYPL1P2-201ENST00000582878 727 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC011500.1-201ENST00000601963 469 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 AC090186.1-201ENST00000605991 572 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 MTCO1P23-201ENST00000415223 1526 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.92□□□□□ -1.46
GFRA1P56159 AC130360.2-201ENST00000533477 1556 ntBASIC5.92□□□□□ -1.46
GFRA1P56159 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GFRA1P56159 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
GFRA1P56159 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 AL596244.1-201ENST00000567068 3779 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC137056.2-201ENST00000624055 1958 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 AL079343.1-201ENST00000572358 1771 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 RNU6-501P-201ENST00000364072 100 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms