Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.5□□□□□ -1.69
HCFC1P51610 RN7SL385P-201ENST00000468873 276 ntBASIC4.5□□□□□ -1.69
HCFC1P51610 GLUD1P3-202ENST00000508551 200 ntBASIC4.5□□□□□ -1.69
HCFC1P51610 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.5□□□□□ -1.69
HCFC1P51610 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.5□□□□□ -1.69
HCFC1P51610 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.5□□□□□ -1.69
HCFC1P51610 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.5□□□□□ -1.69
HCFC1P51610 AC092474.3-201ENST00000603022 568 ntBASIC4.5□□□□□ -1.69
HCFC1P51610 AL356490.1-201ENST00000623079 479 ntBASIC4.5□□□□□ -1.69
HCFC1P51610 AC020978.9-201ENST00000624380 1141 ntBASIC4.5□□□□□ -1.69
HCFC1P51610 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HCFC1P51610 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HCFC1P51610 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCFC1P51610 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCFC1P51610 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.49□□□□□ -1.69
HCFC1P51610 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 AC100757.1-201ENST00000616872 1835 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.49□□□□□ -1.69
HCFC1P51610 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.49□□□□□ -1.69
HCFC1P51610 DHX40P1-201ENST00000588725 1412 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AL358178.1-201ENST00000407698 397 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.49□□□□□ -1.69
HCFC1P51610 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.49□□□□□ -1.69
HCFC1P51610 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 PRPF38AP2-201ENST00000438179 851 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 TXNP2-201ENST00000443918 295 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 VN1R48P-201ENST00000448149 1036 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 NUTF2P7-201ENST00000453086 375 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 OR8K2P-201ENST00000524645 927 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.49□□□□□ -1.69
HCFC1P51610 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.49□□□□□ -1.69
HCFC1P51610 MIR5096-201ENST00000583713 70 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 KATNBL1P1-201ENST00000605192 748 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AC010632.3-201ENST00000611377 369 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AL138960.2-201ENST00000625145 535 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 AC125336.1-201ENST00000508893 2827 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HCFC1P51610 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 AL031595.2-201ENST00000624215 19071 ntBASIC4.49□□□□□ -1.69
HCFC1P51610 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCFC1P51610 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AC239868.2-201ENST00000564237 4527 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 AL049693.1-201ENST00000402760 611 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC068287.1-201ENST00000430283 295 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 MTCO1P57-201ENST00000432182 261 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 RPL5P25-201ENST00000441148 775 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.48□□□□□ -1.69
HCFC1P51610 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 OR2A3P-201ENST00000493774 953 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.48□□□□□ -1.69
HCFC1P51610 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC012400.1-201ENST00000518452 381 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC084824.2-201ENST00000548906 345 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC068831.8-201ENST00000620171 435 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 SDAD1P1-202ENST00000524156 2051 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
HCFC1P51610 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms