Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HSFY1P1-201ENST00000423928 1178 ntBASIC5.15□□□□□ -1.58
HTTP42858 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.15□□□□□ -1.58
HTTP42858 RPS27AP13-201ENST00000498403 237 ntBASIC5.15□□□□□ -1.58
HTTP42858 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.15□□□□□ -1.58
HTTP42858 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.15□□□□□ -1.58
HTTP42858 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.15□□□□□ -1.58
HTTP42858 MIR3944-201ENST00000581277 108 ntBASIC5.15□□□□□ -1.58
HTTP42858 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
HTTP42858 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HTTP42858 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HTTP42858 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC5.15□□□□□ -1.58
HTTP42858 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HTTP42858 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HTTP42858 U3.35-201ENST00000408405 208 ntBASIC5.15□□□□□ -1.59
HTTP42858 RPL7AP49-201ENST00000429522 581 ntBASIC5.15□□□□□ -1.59
HTTP42858 AL591438.1-201ENST00000433508 581 ntBASIC5.15□□□□□ -1.59
HTTP42858 AL356276.2-201ENST00000435919 558 ntBASIC5.15□□□□□ -1.59
HTTP42858 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.15□□□□□ -1.59
HTTP42858 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HTTP42858 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.15□□□□□ -1.59
HTTP42858 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.15□□□□□ -1.59
HTTP42858 NDUFB4P11-201ENST00000560510 395 ntBASIC5.15□□□□□ -1.59
HTTP42858 AC091979.2-201ENST00000607514 214 ntBASIC5.15□□□□□ -1.59
HTTP42858 AC007382.1-201ENST00000624376 2618 ntBASIC5.15□□□□□ -1.59
HTTP42858 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.15□□□□□ -1.59
HTTP42858 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
HTTP42858 AC099654.3-201ENST00000447087 1546 ntBASIC5.15□□□□□ -1.59
HTTP42858 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HTTP42858 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HTTP42858 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HTTP42858 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.14□□□□□ -1.59
HTTP42858 AC007389.2-201ENST00000434630 306 ntBASIC5.14□□□□□ -1.59
HTTP42858 RN7SL132P-201ENST00000478131 296 ntBASIC5.14□□□□□ -1.59
HTTP42858 ZNF415P1-201ENST00000582279 1166 ntBASIC5.14□□□□□ -1.59
HTTP42858 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HTTP42858 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.14□□□□□ -1.59
HTTP42858 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
HTTP42858 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.14□□□□□ -1.59
HTTP42858 NDUFA5P1-201ENST00000433858 341 ntBASIC5.14□□□□□ -1.59
HTTP42858 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 AGGF1P6-201ENST00000569213 976 ntBASIC5.14□□□□□ -1.59
HTTP42858 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.14□□□□□ -1.59
HTTP42858 RN7SL290P-201ENST00000578661 300 ntBASIC5.14□□□□□ -1.59
HTTP42858 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.14□□□□□ -1.59
HTTP42858 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.14□□□□□ -1.59
HTTP42858 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HTTP42858 AC008171.1-201ENST00000395058 200 ntBASIC5.14□□□□□ -1.59
HTTP42858 H2AFZP5-201ENST00000446960 382 ntBASIC5.14□□□□□ -1.59
HTTP42858 AC022133.1-201ENST00000490961 571 ntBASIC5.14□□□□□ -1.59
HTTP42858 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.14□□□□□ -1.59
HTTP42858 MIR3124-201ENST00000582636 67 ntBASIC5.14□□□□□ -1.59
HTTP42858 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.14□□□□□ -1.59
HTTP42858 AL160281.1-201ENST00000605307 311 ntBASIC5.14□□□□□ -1.59
HTTP42858 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HTTP42858 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 AL449283.1-201ENST00000602631 3403 ntBASIC5.13□□□□□ -1.59
HTTP42858 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.13□□□□□ -1.59
HTTP42858 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 AL136231.1-201ENST00000429407 730 ntBASIC5.13□□□□□ -1.59
HTTP42858 RPS3AP12-201ENST00000443616 753 ntBASIC5.13□□□□□ -1.59
HTTP42858 AC026403.1-201ENST00000518938 295 ntBASIC5.13□□□□□ -1.59
HTTP42858 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.13□□□□□ -1.59
HTTP42858 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.13□□□□□ -1.59
HTTP42858 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC5.13□□□□□ -1.59
HTTP42858 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HTTP42858 AL451142.1-201ENST00000375867 775 ntBASIC5.13□□□□□ -1.59
HTTP42858 MIR483-201ENST00000385070 76 ntBASIC5.13□□□□□ -1.59
HTTP42858 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms