Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC007497.1-201ENST00000610421 561 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF9P41273 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF9P41273 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF9P41273 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFSF9P41273 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 Z95114.1-201ENST00000624264 14574 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.29□□□□□ -1.56
TNFSF9P41273 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 RNA5SP87-201ENST00000384155 118 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 U3.30-201ENST00000391308 210 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 RPL10P10-201ENST00000403509 664 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 RNA5SP113-201ENST00000410486 84 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 AC007559.1-201ENST00000428736 355 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 CYCSP24-201ENST00000445119 316 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 SLC25A18P1-201ENST00000449385 454 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 AC105031.1-201ENST00000518550 476 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.29□□□□□ -1.56
TNFSF9P41273 AP001880.2-201ENST00000538233 448 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.29□□□□□ -1.56
TNFSF9P41273 AC007066.2-202ENST00000566531 914 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.29□□□□□ -1.56
TNFSF9P41273 MIR4737-201ENST00000583979 81 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 AL583832.1-201ENST00000603227 784 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 BX005214.3-202ENST00000619809 325 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 AP000432.2-201ENST00000624164 2048 ntBASIC5.29□□□□□ -1.56
TNFSF9P41273 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
TNFSF9P41273 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF9P41273 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFSF9P41273 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFSF9P41273 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TNFSF9P41273 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFSF9P41273 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TNFSF9P41273 SNORA56-201ENST00000383966 129 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.28□□□□□ -1.56
TNFSF9P41273 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.28□□□□□ -1.56
TNFSF9P41273 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFSF9P41273 H2AFZP6-201ENST00000444403 394 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.28□□□□□ -1.56
TNFSF9P41273 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.28□□□□□ -1.56
TNFSF9P41273 SNORA26.10-201ENST00000516427 141 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFSF9P41273 MIR3667-201ENST00000581025 74 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.28□□□□□ -1.56
TNFSF9P41273 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFSF9P41273 AC010809.3-201ENST00000621310 641 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 AC243960.7-201ENST00000623532 707 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 AP000648.2-201ENST00000624182 404 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 AC073869.10-201ENST00000642016 354 ntBASIC5.28□□□□□ -1.56
TNFSF9P41273 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.28□□□□□ -1.56
TNFSF9P41273 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TNFSF9P41273 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TNFSF9P41273 RNA5SP187-201ENST00000384400 119 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.27□□□□□ -1.57
TNFSF9P41273 RNU6-233P-201ENST00000410845 141 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AL645608.4-201ENST00000423619 154 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC073648.4-201ENST00000442655 781 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.27□□□□□ -1.57
TNFSF9P41273 RPL36AP15-201ENST00000444514 266 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF9P41273 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.27□□□□□ -1.57
TNFSF9P41273 RBMY2TP-201ENST00000451162 947 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 AC073073.1-201ENST00000493920 463 ntBASIC5.27□□□□□ -1.57
TNFSF9P41273 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TNFSF9P41273 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms