Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC1P35251 HSPA8P19-201ENST00000505359 1517 ntBASIC5.6□□□□□ -1.51
RFC1P35251 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 MIR323A-201ENST00000362199 86 ntBASIC5.6□□□□□ -1.51
RFC1P35251 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC1P35251 MIR620-201ENST00000385232 95 ntBASIC5.6□□□□□ -1.51
RFC1P35251 MIR143-201ENST00000385300 106 ntBASIC5.6□□□□□ -1.51
RFC1P35251 RNU1-77P-201ENST00000390868 162 ntBASIC5.6□□□□□ -1.51
RFC1P35251 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 HMGB3P7-201ENST00000400214 611 ntBASIC5.6□□□□□ -1.51
RFC1P35251 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AL513325.1-201ENST00000417716 1034 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC1P35251 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC1P35251 AC124944.2-201ENST00000429866 1242 ntBASIC5.6□□□□□ -1.51
RFC1P35251 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC1P35251 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 AC016724.1-201ENST00000453215 421 ntBASIC5.6□□□□□ -1.51
RFC1P35251 RPL7P45-201ENST00000455851 743 ntBASIC5.6□□□□□ -1.51
RFC1P35251 CABYRP1-201ENST00000465493 1045 ntBASIC5.6□□□□□ -1.51
RFC1P35251 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC1P35251 RN7SL184P-201ENST00000488308 297 ntBASIC5.6□□□□□ -1.51
RFC1P35251 RPS12P31-201ENST00000491419 398 ntBASIC5.6□□□□□ -1.51
RFC1P35251 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 AK4P6-201ENST00000505168 528 ntBASIC5.6□□□□□ -1.51
RFC1P35251 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 AC010468.3-201ENST00000508225 458 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 IGLVIV-64-201ENST00000518581 301 ntBASIC5.6□□□□□ -1.51
RFC1P35251 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 AC008147.3-201ENST00000548666 354 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 AC027216.1-201ENST00000577726 685 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 RN7SL290P-201ENST00000578661 300 ntBASIC5.6□□□□□ -1.51
RFC1P35251 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC1P35251 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC1P35251 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC1P35251 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC1P35251 BNIP3P40-201ENST00000596017 556 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC026979.4-201ENST00000606555 645 ntBASIC5.6□□□□□ -1.51
RFC1P35251 AC104763.3-201ENST00000613765 618 ntBASIC5.6□□□□□ -1.51
RFC1P35251 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC1P35251 AC138965.3-201ENST00000623875 498 ntBASIC5.6□□□□□ -1.51
RFC1P35251 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC1P35251 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
RFC1P35251 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC1P35251 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC1P35251 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RFC1P35251 TTC39DP-201ENST00000416781 1688 ntBASIC5.59□□□□□ -1.51
RFC1P35251 PCAT14-202ENST00000627127 3935 ntBASIC5.59□□□□□ -1.51
RFC1P35251 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC1P35251 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 NEAT1-202ENST00000501122 22743 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AC009501.3-201ENST00000605001 1352 ntBASIC5.59□□□□□ -1.51
RFC1P35251 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RFC1P35251 RNU1-19P-201ENST00000363306 165 ntBASIC5.59□□□□□ -1.51
RFC1P35251 RNA5SP435-201ENST00000364044 108 ntBASIC5.59□□□□□ -1.51
RFC1P35251 SNORD115-48-201ENST00000364764 76 ntBASIC5.59□□□□□ -1.51
RFC1P35251 OR1L6-202ENST00000373684 1044 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AC104297.1-201ENST00000393779 870 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL035405.1-201ENST00000400795 710 ntBASIC5.59□□□□□ -1.51
RFC1P35251 ST13P16-201ENST00000401760 781 ntBASIC5.59□□□□□ -1.51
RFC1P35251 RSL24D1P1-201ENST00000404972 493 ntBASIC5.59□□□□□ -1.51
RFC1P35251 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AC002524.1-201ENST00000411687 547 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL390774.1-201ENST00000411924 246 ntBASIC5.59□□□□□ -1.51
RFC1P35251 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC1P35251 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.59□□□□□ -1.51
RFC1P35251 HSPD1P12-201ENST00000429127 1069 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL136231.1-201ENST00000429407 730 ntBASIC5.59□□□□□ -1.51
RFC1P35251 ZNF965P-201ENST00000432501 817 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 RPL12P18-201ENST00000437175 325 ntBASIC5.59□□□□□ -1.51
RFC1P35251 CYCSP12-201ENST00000437729 300 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC1P35251 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 FCF1P6-201ENST00000456841 595 ntBASIC5.59□□□□□ -1.51
RFC1P35251 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC1P35251 RN7SL423P-201ENST00000486202 304 ntBASIC5.59□□□□□ -1.51
RFC1P35251 RPL23AP73-201ENST00000492507 471 ntBASIC5.59□□□□□ -1.51
RFC1P35251 FABP5P6-201ENST00000510588 409 ntBASIC5.59□□□□□ -1.51
RFC1P35251 IMPA1P1-201ENST00000510718 842 ntBASIC5.59□□□□□ -1.51
RFC1P35251 RNA5SP373-201ENST00000517271 95 ntBASIC5.59□□□□□ -1.51
RFC1P35251 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC1P35251 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC1P35251 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms