Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNA5SP392-201ENST00000516905 112 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AP001496.3-201ENST00000580230 913 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC087468.1-201ENST00000604365 630 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 AL512356.3-201ENST00000623005 461 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 MTND4P26-201ENST00000415971 1359 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
HLA-DMAP28067 ECM1P2-201ENST00000503354 1577 ntBASIC4.36□□□□□ -1.71
HLA-DMAP28067 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DMAP28067 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DMAP28067 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 MIR448-201ENST00000362131 111 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 OR8V1P-201ENST00000395193 873 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DMAP28067 VDAC1P9-201ENST00000412766 841 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 ATG4AP1-201ENST00000416893 538 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC005033.1-201ENST00000428904 813 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 TIMM8BP2-201ENST00000445940 251 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 EEF1B2P3-201ENST00000447718 678 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC093166.3-201ENST00000448785 303 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 RN7SL517P-201ENST00000462240 305 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 RPL7P40-201ENST00000481703 745 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC079075.1-201ENST00000559543 878 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 NDUFB4P11-201ENST00000560510 395 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AP005119.2-201ENST00000579735 1105 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 SLC25A36P1-201ENST00000590111 465 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC008115.3-201ENST00000614874 549 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 AL357153.4-201ENST00000620487 1016 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 AC132068.1-201ENST00000623805 459 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 DDX18P5-201ENST00000534547 1306 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DMAP28067 HCFC2P1-201ENST00000392864 1592 ntBASIC4.35□□□□□ -1.71
HLA-DMAP28067 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 RN7SKP184-201ENST00000362348 333 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC019155.1-201ENST00000382242 574 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC004386.1-201ENST00000393214 761 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 MIR1275-201ENST00000408770 80 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC069285.2-201ENST00000440210 275 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 EEF1B2P6-201ENST00000445713 673 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC004980.3-201ENST00000447046 365 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms