Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL445187.1-201ENST00000502685 260 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 OR7E83P-201ENST00000511021 970 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 OR5B19P-201ENST00000531766 928 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 AC068305.2-201ENST00000550567 1205 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC244034.2-201ENST00000562504 509 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.42□□□□□ -1.22
VARSP26640 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 AC016629.2-201ENST00000597341 199 ntBASIC7.42□□□□□ -1.22
VARSP26640 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.42□□□□□ -1.22
VARSP26640 AL356585.4-201ENST00000623078 1229 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC040168.1-201ENST00000623594 991 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC231657.1-201ENST00000624313 397 ntBASIC7.42□□□□□ -1.22
VARSP26640 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 MTND5P33-201ENST00000571250 1450 ntBASIC7.42□□□□□ -1.22
VARSP26640 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 LINC00622-201ENST00000562811 1570 ntBASIC7.42□□□□□ -1.22
VARSP26640 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
VARSP26640 AC006378.2-201ENST00000623178 2476 ntBASIC7.41□□□□□ -1.22
VARSP26640 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.41□□□□□ -1.22
VARSP26640 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
VARSP26640 RNA5SP483-201ENST00000363431 118 ntBASIC7.41□□□□□ -1.22
VARSP26640 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.41□□□□□ -1.22
VARSP26640 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
VARSP26640 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 SNORA69-201ENST00000383895 132 ntBASIC7.41□□□□□ -1.22
VARSP26640 MIR106B-201ENST00000385301 82 ntBASIC7.41□□□□□ -1.22
VARSP26640 AL034403.1-201ENST00000399414 885 ntBASIC7.41□□□□□ -1.22
VARSP26640 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 AL139805.1-201ENST00000407837 289 ntBASIC7.41□□□□□ -1.22
VARSP26640 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.41□□□□□ -1.22
VARSP26640 SNRPFP1-201ENST00000414761 252 ntBASIC7.41□□□□□ -1.22
VARSP26640 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 MTCO2P27-201ENST00000420740 428 ntBASIC7.41□□□□□ -1.22
VARSP26640 AL022100.1-202ENST00000421214 548 ntBASIC7.41□□□□□ -1.22
VARSP26640 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 AC093107.1-201ENST00000422772 609 ntBASIC7.41□□□□□ -1.22
VARSP26640 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 CBX3P6-201ENST00000430257 527 ntBASIC7.41□□□□□ -1.22
VARSP26640 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARSP26640 RPL7P29-201ENST00000437151 728 ntBASIC7.41□□□□□ -1.22
VARSP26640 RPL26P30-201ENST00000453533 435 ntBASIC7.41□□□□□ -1.22
VARSP26640 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.41□□□□□ -1.22
VARSP26640 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 RPL34P22-201ENST00000468193 318 ntBASIC7.41□□□□□ -1.22
VARSP26640 RPL7P39-201ENST00000481157 744 ntBASIC7.41□□□□□ -1.22
VARSP26640 FTH1P23-201ENST00000492727 550 ntBASIC7.41□□□□□ -1.22
VARSP26640 POU5F1P7-201ENST00000508759 541 ntBASIC7.41□□□□□ -1.22
VARSP26640 RNA5SP401-201ENST00000515920 127 ntBASIC7.41□□□□□ -1.22
VARSP26640 RN7SKP242-201ENST00000515967 289 ntBASIC7.41□□□□□ -1.22
VARSP26640 Y_RNA.691-201ENST00000516611 103 ntBASIC7.41□□□□□ -1.22
VARSP26640 RNU6-1261P-201ENST00000517194 104 ntBASIC7.41□□□□□ -1.22
VARSP26640 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC7.41□□□□□ -1.22
VARSP26640 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.41□□□□□ -1.22
VARSP26640 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.41□□□□□ -1.22
VARSP26640 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 AP002812.4-201ENST00000532139 286 ntBASIC7.41□□□□□ -1.22
VARSP26640 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.41□□□□□ -1.22
VARSP26640 NANOGNBP2-201ENST00000544753 553 ntBASIC7.41□□□□□ -1.22
VARSP26640 AC011611.6-201ENST00000547483 255 ntBASIC7.41□□□□□ -1.22
VARSP26640 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.41□□□□□ -1.22
VARSP26640 SCOCP1-201ENST00000554676 349 ntBASIC7.41□□□□□ -1.22
VARSP26640 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.41□□□□□ -1.22
VARSP26640 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms