Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH3P20585 AL357078.2-201ENST00000416486 427 ntBASIC5.2□□□□□ -1.58
MSH3P20585 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 OR52B5P-201ENST00000435337 951 ntBASIC5.2□□□□□ -1.58
MSH3P20585 RAB9AP5-201ENST00000437794 597 ntBASIC5.2□□□□□ -1.58
MSH3P20585 AC074367.1-201ENST00000438685 1125 ntBASIC5.2□□□□□ -1.58
MSH3P20585 RPS29P10-201ENST00000439197 166 ntBASIC5.2□□□□□ -1.58
MSH3P20585 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH3P20585 RAB9AP2-201ENST00000443911 597 ntBASIC5.2□□□□□ -1.58
MSH3P20585 MTND5P8-201ENST00000449817 1083 ntBASIC5.2□□□□□ -1.58
MSH3P20585 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
MSH3P20585 Z92846.1-201ENST00000456203 268 ntBASIC5.2□□□□□ -1.58
MSH3P20585 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 AC008628.1-201ENST00000508663 265 ntBASIC5.2□□□□□ -1.58
MSH3P20585 OR7E10P-201ENST00000526420 991 ntBASIC5.2□□□□□ -1.58
MSH3P20585 OR4A46P-201ENST00000527255 933 ntBASIC5.2□□□□□ -1.58
MSH3P20585 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH3P20585 AC092451.2-201ENST00000538746 658 ntBASIC5.2□□□□□ -1.58
MSH3P20585 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH3P20585 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSH3P20585 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.2□□□□□ -1.58
MSH3P20585 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH3P20585 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH3P20585 AP000894.4-201ENST00000610185 483 ntBASIC5.2□□□□□ -1.58
MSH3P20585 MIR6839-201ENST00000620425 113 ntBASIC5.2□□□□□ -1.58
MSH3P20585 OR52B5P-202ENST00000641118 1110 ntBASIC5.2□□□□□ -1.58
MSH3P20585 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSH3P20585 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH3P20585 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH3P20585 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH3P20585 AC092111.2-201ENST00000611627 1414 ntBASIC5.2□□□□□ -1.58
MSH3P20585 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH3P20585 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
MSH3P20585 CIR1P2-201ENST00000514821 1342 ntBASIC5.2□□□□□ -1.58
MSH3P20585 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MSH3P20585 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
MSH3P20585 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH3P20585 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 AC068446.1-201ENST00000556425 1549 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC011503.2-201ENST00000594230 1500 ntBASIC5.19□□□□□ -1.58
MSH3P20585 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MSH3P20585 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 RNU6-1331P-201ENST00000363658 106 ntBASIC5.19□□□□□ -1.58
MSH3P20585 RNU1-146P-201ENST00000364015 165 ntBASIC5.19□□□□□ -1.58
MSH3P20585 MIR600-201ENST00000385007 98 ntBASIC5.19□□□□□ -1.58
MSH3P20585 MIR589-201ENST00000385238 99 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 AC002524.1-201ENST00000411687 547 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 AL034379.1-201ENST00000423216 253 ntBASIC5.19□□□□□ -1.58
MSH3P20585 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 NANOGP4-201ENST00000427230 913 ntBASIC5.19□□□□□ -1.58
MSH3P20585 MTND4LP7-201ENST00000431728 294 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 AL353718.1-201ENST00000451028 517 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 AC074386.1-201ENST00000476560 767 ntBASIC5.19□□□□□ -1.58
MSH3P20585 RN7SL629P-201ENST00000489622 285 ntBASIC5.19□□□□□ -1.58
MSH3P20585 RPL15P21-201ENST00000495592 567 ntBASIC5.19□□□□□ -1.58
MSH3P20585 HIGD1AP14-201ENST00000507617 282 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 AC006427.1-201ENST00000514359 712 ntBASIC5.19□□□□□ -1.58
MSH3P20585 SCARNA21.2-201ENST00000516600 166 ntBASIC5.19□□□□□ -1.58
MSH3P20585 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 OR4R2P-201ENST00000530815 597 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC005000.1-201ENST00000536192 288 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC127381.1-201ENST00000555979 939 ntBASIC5.19□□□□□ -1.58
MSH3P20585 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 RN7SL708P-201ENST00000580952 299 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
MSH3P20585 AC011626.1-201ENST00000604710 562 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC084036.1-201ENST00000609190 508 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC126915.2-201ENST00000610957 190 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AL512506.1-201ENST00000613918 449 ntBASIC5.19□□□□□ -1.58
MSH3P20585 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.19□□□□□ -1.58
MSH3P20585 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 AC006453.5-201ENST00000636451 619 ntBASIC5.19□□□□□ -1.58
MSH3P20585 AC135068.12-201ENST00000637370 931 ntBASIC5.19□□□□□ -1.58
MSH3P20585 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MSH3P20585 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH3P20585 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.19□□□□□ -1.58
MSH3P20585 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms