Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
XRCC1P18887 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
XRCC1P18887 AC104260.2-201ENST00000623551 3497 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
XRCC1P18887 RNU1-74P-201ENST00000384108 171 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
XRCC1P18887 AC093162.1-201ENST00000419682 124 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.07□□□□□ -1.6
XRCC1P18887 OR2AH1P-201ENST00000425717 928 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 HSPE1P16-201ENST00000426640 348 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.07□□□□□ -1.6
XRCC1P18887 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.07□□□□□ -1.6
XRCC1P18887 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.07□□□□□ -1.6
XRCC1P18887 BTF3P6-201ENST00000448054 499 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 AC108161.1-201ENST00000461060 402 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
XRCC1P18887 AC093270.2-201ENST00000486157 792 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 NDUFA5P12-201ENST00000503796 343 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 AC091917.2-201ENST00000505002 744 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.07□□□□□ -1.6
XRCC1P18887 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 AC025857.1-201ENST00000525252 377 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.07□□□□□ -1.6
XRCC1P18887 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.07□□□□□ -1.6
XRCC1P18887 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 AC011626.1-201ENST00000604710 562 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
XRCC1P18887 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
XRCC1P18887 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
XRCC1P18887 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
XRCC1P18887 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
XRCC1P18887 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AC023421.1-201ENST00000590535 1785 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
XRCC1P18887 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 RPL12P43-201ENST00000420608 499 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
XRCC1P18887 RPS27P18-201ENST00000431701 247 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 KNOP1P3-201ENST00000446933 426 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AC013701.1-201ENST00000522657 465 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 HNRNPRP2-201ENST00000528421 743 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 AP002373.2-201ENST00000541631 1060 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC084033.1-201ENST00000550830 633 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 MIR4646-201ENST00000580775 63 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 AC011840.5-201ENST00000582125 771 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.06□□□□□ -1.6
XRCC1P18887 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC118658.2-201ENST00000618697 459 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 MIR6730-201ENST00000622213 67 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC011447.7-201ENST00000624228 1590 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC112255.1-201ENST00000624070 2493 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.06□□□□□ -1.6
XRCC1P18887 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRCC1P18887 AC083843.2-201ENST00000568248 6253 ntBASIC5.06□□□□□ -1.6
XRCC1P18887 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms