Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC008549.2-201ENST00000333482 706 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.34□□□□□ -1.71
CTLA4P16410 AC005522.1-201ENST00000395416 346 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 TBCAP2-201ENST00000416175 326 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 RGS17P1-201ENST00000423358 553 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 EIF4HP2-201ENST00000424380 563 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.34□□□□□ -1.71
CTLA4P16410 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.34□□□□□ -1.71
CTLA4P16410 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.34□□□□□ -1.71
CTLA4P16410 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.34□□□□□ -1.71
CTLA4P16410 RN7SL319P-201ENST00000480656 221 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 RN7SL97P-201ENST00000486780 299 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 AC112184.1-201ENST00000505179 312 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.34□□□□□ -1.71
CTLA4P16410 MRPS33P2-201ENST00000507850 322 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.34□□□□□ -1.71
CTLA4P16410 RNA5SP92-201ENST00000516437 110 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 Y_RNA.719-201ENST00000517156 106 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 MIR3691-201ENST00000578066 90 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.34□□□□□ -1.71
CTLA4P16410 AC006116.3-201ENST00000592968 361 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.34□□□□□ -1.71
CTLA4P16410 AL356752.1-201ENST00000615844 593 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 MIR6886-201ENST00000619864 61 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CTLA4P16410 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.34□□□□□ -1.71
CTLA4P16410 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 AL731566.1-201ENST00000620490 1937 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CTLA4P16410 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTLA4P16410 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.34□□□□□ -1.72
CTLA4P16410 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTLA4P16410 AC107068.1-201ENST00000563286 4218 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.33□□□□□ -1.72
CTLA4P16410 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CTLA4P16410 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CTLA4P16410 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.33□□□□□ -1.72
CTLA4P16410 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 AL034370.1-201ENST00000397254 1590 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 CASC19-281ENST00000642118 1554 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 CASC19-206ENST00000641028 1430 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTLA4P16410 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTLA4P16410 RNU6-249P-201ENST00000363016 102 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 U8.4-201ENST00000363626 134 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 AL078599.1-201ENST00000402075 293 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 Z97832.1-201ENST00000402490 328 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AL021331.1-201ENST00000402817 582 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 GJA6P-201ENST00000415117 1042 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.33□□□□□ -1.72
CTLA4P16410 RPS26P4-201ENST00000431743 355 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.33□□□□□ -1.72
CTLA4P16410 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 AC116562.1-201ENST00000485355 781 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AC020890.1-201ENST00000491837 504 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 RNA5SP392-201ENST00000516905 112 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
CTLA4P16410 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 OR8G7P-201ENST00000616658 848 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 MIR6826-201ENST00000617808 98 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AL022401.1-201ENST00000619498 108 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AC012414.7-202ENST00000622705 1090 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AC243960.7-201ENST00000623532 707 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.33□□□□□ -1.72
CTLA4P16410 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CTLA4P16410 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTLA4P16410 SALL4P2-201ENST00000423288 2910 ntBASIC4.33□□□□□ -1.72
CTLA4P16410 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CTLA4P16410 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTLA4P16410 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CTLA4P16410 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 AC093849.1-201ENST00000563631 2209 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms