Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 OR10G5P-201ENST00000532733 358 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 OR11J2P-201ENST00000555298 907 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AC022884.2-201ENST00000578535 580 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 PRPF19P1-201ENST00000584766 898 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 AC118658.2-201ENST00000618697 459 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFRAP16234 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AC135068.12-201ENST00000637370 931 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFRAP16234 OR51C1P-202ENST00000641159 1444 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFRAP16234 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFRAP16234 AC005005.4-201ENST00000623789 16698 ntBASIC5.46□□□□□ -1.54
PDGFRAP16234 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 AL603750.1-201ENST00000624216 1717 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 MUC2-202ENST00000613187 4845 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
PDGFRAP16234 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 RNU6-152P-201ENST00000384037 107 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC233289.1-201ENST00000403700 508 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AL136116.2-201ENST00000404020 785 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 DUTP5-201ENST00000406790 469 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 RN7SKP273-201ENST00000411392 314 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFRAP16234 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFRAP16234 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFRAP16234 EEF1B2P5-201ENST00000444820 548 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AL157884.3-201ENST00000448273 1184 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 MORF4L1P4-201ENST00000450245 976 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 BX842559.2-201ENST00000451418 605 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 MTND3P4-201ENST00000453537 303 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 GTF2F2P1-201ENST00000511083 675 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFRAP16234 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFRAP16234 HAUS8P1-201ENST00000549005 542 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC019322.1-201ENST00000571869 389 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC007448.1-201ENST00000582714 234 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC124856.1-201ENST00000600819 896 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC016769.4-201ENST00000616893 535 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC020763.5-201ENST00000623298 430 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PDGFRAP16234 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC022417.1-201ENST00000624768 1303 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFRAP16234 AC002525.1-201ENST00000624392 1622 ntBASIC5.45□□□□□ -1.54
PDGFRAP16234 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
PDGFRAP16234 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
PDGFRAP16234 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 TRIM51GP-201ENST00000534741 1350 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 TCP11X1-202ENST00000622971 1372 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 RPL23P2-201ENST00000320371 421 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 AC007618.1-201ENST00000366455 732 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 MIR600-201ENST00000385007 98 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 SNORD65-201ENST00000391079 73 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AL358178.1-201ENST00000407698 397 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 EI24P4-201ENST00000423683 1078 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 AL445528.1-201ENST00000426330 420 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 RPS4XP16-201ENST00000427198 791 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFRAP16234 TRIM60P13-201ENST00000432350 1283 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AL627308.1-201ENST00000435693 821 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 RPL5P25-201ENST00000441148 775 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms