Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 MIPEPP2-201ENST00000422560 1819 ntBASIC5.9□□□□□ -1.46
TOP1P11387 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TOP1P11387 RNU6-249P-201ENST00000363016 102 ntBASIC5.9□□□□□ -1.46
TOP1P11387 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 Z97832.1-201ENST00000402490 328 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AL133270.1-201ENST00000402635 279 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AL035079.1-201ENST00000405210 287 ntBASIC5.9□□□□□ -1.46
TOP1P11387 RNU6-233P-201ENST00000410845 141 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.9□□□□□ -1.46
TOP1P11387 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.9□□□□□ -1.46
TOP1P11387 PA2G4P6-201ENST00000438325 1197 ntBASIC5.9□□□□□ -1.46
TOP1P11387 TCEA1P1-201ENST00000449716 880 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 AC005412.2-201ENST00000492004 341 ntBASIC5.9□□□□□ -1.46
TOP1P11387 RN7SL441P-201ENST00000492388 296 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AC140172.1-201ENST00000502928 141 ntBASIC5.9□□□□□ -1.46
TOP1P11387 NIFKP7-201ENST00000503365 834 ntBASIC5.9□□□□□ -1.46
TOP1P11387 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.9□□□□□ -1.46
TOP1P11387 RFPL4AP3-201ENST00000515267 345 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.9□□□□□ -1.46
TOP1P11387 AC008033.2-201ENST00000542626 177 ntBASIC5.9□□□□□ -1.46
TOP1P11387 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.9□□□□□ -1.46
TOP1P11387 MIR4436B2-201ENST00000581415 91 ntBASIC5.9□□□□□ -1.46
TOP1P11387 MIR4436B1-201ENST00000583272 91 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AC011487.3-201ENST00000593607 453 ntBASIC5.9□□□□□ -1.46
TOP1P11387 Z95327.3-201ENST00000610385 572 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AL445528.2-201ENST00000620582 470 ntBASIC5.9□□□□□ -1.46
TOP1P11387 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.9□□□□□ -1.46
TOP1P11387 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TOP1P11387 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
TOP1P11387 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TOP1P11387 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.9□□□□□ -1.47
TOP1P11387 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.9□□□□□ -1.47
TOP1P11387 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TOP1P11387 THAP12P5-201ENST00000405864 2275 ntBASIC5.9□□□□□ -1.47
TOP1P11387 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
TOP1P11387 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TOP1P11387 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOP1P11387 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.89□□□□□ -1.47
TOP1P11387 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOP1P11387 AP002530.1-201ENST00000405705 684 ntBASIC5.89□□□□□ -1.47
TOP1P11387 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOP1P11387 CHEK2P3-201ENST00000416118 248 ntBASIC5.89□□□□□ -1.47
TOP1P11387 RPS29P9-201ENST00000440360 171 ntBASIC5.89□□□□□ -1.47
TOP1P11387 ARAFP2-201ENST00000440565 559 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AL137845.2-201ENST00000444292 988 ntBASIC5.89□□□□□ -1.47
TOP1P11387 SUMO2P1-206ENST00000445436 284 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AC004980.3-201ENST00000447046 365 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP1P11387 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TOP1P11387 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP1P11387 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.89□□□□□ -1.47
TOP1P11387 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP1P11387 FTH1P11-201ENST00000517577 551 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AP000859.1-201ENST00000525536 307 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AC005000.1-201ENST00000536192 288 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP1P11387 BNIP3P32-201ENST00000600015 554 ntBASIC5.89□□□□□ -1.47
TOP1P11387 AC008536.1-201ENST00000602872 669 ntBASIC5.89□□□□□ -1.47
TOP1P11387 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.89□□□□□ -1.47
TOP1P11387 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.89□□□□□ -1.47
TOP1P11387 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.89□□□□□ -1.47
TOP1P11387 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TOP1P11387 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 MTND5P23-201ENST00000430812 1655 ntBASIC5.88□□□□□ -1.47
TOP1P11387 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
TOP1P11387 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TOP1P11387 ATP5HP3-201ENST00000396994 486 ntBASIC5.88□□□□□ -1.47
TOP1P11387 CTSL3P-202ENST00000412179 788 ntBASIC5.88□□□□□ -1.47
TOP1P11387 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP1P11387 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 OR2AM1P-201ENST00000422137 422 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP1P11387 SNRPFP2-201ENST00000440710 251 ntBASIC5.88□□□□□ -1.47
TOP1P11387 CYCSP24-201ENST00000445119 316 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AC012512.1-201ENST00000446594 718 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.88□□□□□ -1.47
TOP1P11387 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 AC012339.2-201ENST00000523996 453 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AL512310.9-201ENST00000553311 948 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.88□□□□□ -1.47
TOP1P11387 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.88□□□□□ -1.47
TOP1P11387 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.88□□□□□ -1.47
TOP1P11387 AC015849.6-201ENST00000605454 474 ntBASIC5.88□□□□□ -1.47
TOP1P11387 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.88□□□□□ -1.47
TOP1P11387 AL049539.1-201ENST00000611964 459 ntBASIC5.88□□□□□ -1.47
TOP1P11387 AL356752.1-201ENST00000615844 593 ntBASIC5.88□□□□□ -1.47
TOP1P11387 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms