Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.86□□□□□ -1.31
HMGB1P09429 AP001357.1-201ENST00000586304 1053 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.86□□□□□ -1.31
HMGB1P09429 HIRAP1-201ENST00000605318 787 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AC120053.1-201ENST00000607706 736 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AP005229.2-201ENST00000609980 697 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 AL445528.2-201ENST00000620582 470 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGB1P09429 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.86□□□□□ -1.31
HMGB1P09429 AC004158.1-201ENST00000564508 4319 ntBASIC6.86□□□□□ -1.31
HMGB1P09429 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
HMGB1P09429 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGB1P09429 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.86□□□□□ -1.31
HMGB1P09429 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HMGB1P09429 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 RNA5SP273-201ENST00000362484 113 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HMGB1P09429 AC004386.1-201ENST00000393214 761 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGB1P09429 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.85□□□□□ -1.31
HMGB1P09429 OR7E116P-201ENST00000448529 957 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 RPS17P15-201ENST00000475609 349 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 RN7SL591P-201ENST00000496150 292 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 RNA5SP473-201ENST00000516402 125 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGB1P09429 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 AC011611.5-201ENST00000552477 578 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 ZNF322P1-201ENST00000568013 1209 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGB1P09429 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGB1P09429 OR1F2P-201ENST00000570470 933 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 MIR4271-201ENST00000582451 67 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 AC025857.2-201ENST00000602711 238 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGB1P09429 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.85□□□□□ -1.31
HMGB1P09429 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 AC239868.2-201ENST00000564237 4527 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.85□□□□□ -1.31
HMGB1P09429 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 WDR95P-201ENST00000425638 1542 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
HMGB1P09429 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HMGB1P09429 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.85□□□□□ -1.31
HMGB1P09429 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 AC083899.2-201ENST00000423285 1376 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
HMGB1P09429 Z73965.1-201ENST00000623412 2297 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 RNA5SP477-201ENST00000362639 119 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 U3.10-201ENST00000364459 214 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 SNORA11C-201ENST00000408532 129 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 EIF4A1P1-201ENST00000420241 934 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 DEFB130D-201ENST00000426866 237 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGB1P09429 NDUFS5P5-201ENST00000437256 321 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 TXNP5-201ENST00000441043 315 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC073109.1-201ENST00000445066 978 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGB1P09429 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.84□□□□□ -1.31
HMGB1P09429 PSAT1P4-201ENST00000466500 526 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 RN7SL170P-201ENST00000487098 295 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 TPT1P3-201ENST00000492841 512 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGB1P09429 Y_RNA.667-201ENST00000516212 107 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGB1P09429 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 HMGB1P1-201ENST00000522557 636 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 HMGN2P36-201ENST00000529541 409 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC092451.2-201ENST00000538746 658 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms