Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 IQCB2P-201ENST00000401788 1633 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 MIR133B-201ENST00000362210 119 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 MIR1275-201ENST00000408770 80 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 PTP4A1P1-201ENST00000420539 515 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 DYNLL1P7-201ENST00000429273 258 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC069154.1-201ENST00000432914 542 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 MAPRE1P3-201ENST00000435438 796 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.79□□□□□ -1.8
CXCL1P09341 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC011753.3-201ENST00000443436 406 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 MTND6P5-201ENST00000448266 512 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC104306.1-201ENST00000449702 371 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AL691482.1-201ENST00000453255 87 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC112184.1-201ENST00000505179 312 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 CYCSP22-201ENST00000517555 339 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 HMGB1P40-201ENST00000525121 540 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC005479.3-201ENST00000602790 431 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC020634.1-201ENST00000608701 549 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 CU639417.4-201ENST00000623928 207 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CXCL1P09341 MIR193BHG-214ENST00000641765 509 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 AC092747.4-201ENST00000620519 1861 ntBASIC3.79□□□□□ -1.8
CXCL1P09341 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL1P09341 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL1P09341 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CXCL1P09341 AC011266.1-201ENST00000624119 3569 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.78□□□□□ -1.8
CXCL1P09341 HSPD1P14-201ENST00000432666 1618 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CXCL1P09341 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 OR52B3P-201ENST00000314715 928 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CXCL1P09341 MIR105-1-201ENST00000385222 81 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 MIR513A2-201ENST00000385249 127 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CXCL1P09341 NUDT19P3-201ENST00000404698 555 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 U3.35-201ENST00000408405 208 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 RN7SKP216-201ENST00000411050 312 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 VDAC1P9-201ENST00000412766 841 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL1P09341 OR2AM1P-201ENST00000422137 422 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CXCL1P09341 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 AL662874.1-201ENST00000426065 230 ntBASIC3.78□□□□□ -1.8
CXCL1P09341 DSTNP5-201ENST00000427921 523 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms