Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 RNU1-132P-201ENST00000364300 164 ntBASIC2.92□□□□□ -1.94
APOBP04114 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.92□□□□□ -1.94
APOBP04114 RPL12P9-201ENST00000412942 488 ntBASIC2.92□□□□□ -1.94
APOBP04114 YY1P1-201ENST00000427625 668 ntBASIC2.92□□□□□ -1.94
APOBP04114 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 AC093249.4-201ENST00000564755 259 ntBASIC2.92□□□□□ -1.94
APOBP04114 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 AP001029.2-203ENST00000589795 4910 ntBASIC2.92□□□□□ -1.94
APOBP04114 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AC021146.4-201ENST00000309229 279 ntBASIC2.92□□□□□ -1.94
APOBP04114 VN1R34P-201ENST00000447387 883 ntBASIC2.92□□□□□ -1.94
APOBP04114 BX842559.2-201ENST00000451418 605 ntBASIC2.92□□□□□ -1.94
APOBP04114 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 ACTR3BP5-201ENST00000448440 1479 ntBASIC2.92□□□□□ -1.94
APOBP04114 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 AC125257.1-201ENST00000560400 2930 ntBASIC2.92□□□□□ -1.94
APOBP04114 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 PTMAP5-201ENST00000393073 333 ntBASIC2.92□□□□□ -1.94
APOBP04114 RPL5P32-201ENST00000454085 879 ntBASIC2.92□□□□□ -1.94
APOBP04114 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 IGBP1P4-201ENST00000503202 879 ntBASIC2.92□□□□□ -1.94
APOBP04114 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AC021422.1-201ENST00000621212 473 ntBASIC2.92□□□□□ -1.94
APOBP04114 MIR492-201ENST00000638676 116 ntBASIC2.92□□□□□ -1.94
APOBP04114 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 AC099654.3-201ENST00000447087 1546 ntBASIC2.92□□□□□ -1.94
APOBP04114 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 LCOR-201ENST00000286067 4542 ntBASIC2.92□□□□□ -1.94
APOBP04114 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC2.92□□□□□ -1.94
APOBP04114 U3.28-201ENST00000391249 210 ntBASIC2.92□□□□□ -1.94
APOBP04114 RPS27AP11-201ENST00000402798 447 ntBASIC2.92□□□□□ -1.94
APOBP04114 MTCO1P54-201ENST00000430139 712 ntBASIC2.92□□□□□ -1.94
APOBP04114 RN7SL810P-201ENST00000493031 276 ntBASIC2.92□□□□□ -1.94
APOBP04114 PGBD4P4-201ENST00000509673 613 ntBASIC2.92□□□□□ -1.94
APOBP04114 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.92□□□□□ -1.94
APOBP04114 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC2.92□□□□□ -1.94
APOBP04114 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
APOBP04114 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
APOBP04114 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
APOBP04114 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 ICE2P1-201ENST00000512800 1849 ntBASIC2.91□□□□□ -1.94
APOBP04114 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
APOBP04114 AC005261.4-201ENST00000600047 1385 ntBASIC2.91□□□□□ -1.94
APOBP04114 RN7SKP153-201ENST00000365026 316 ntBASIC2.91□□□□□ -1.94
APOBP04114 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
APOBP04114 RNA5SP372-201ENST00000390836 115 ntBASIC2.91□□□□□ -1.94
APOBP04114 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.91□□□□□ -1.94
APOBP04114 RNU1-103P-201ENST00000516502 125 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms