Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 AC004241.3-201ENST00000611728 517 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFBP01127 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFBP01127 AC002044.3-201ENST00000623314 541 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFBP01127 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 RBPJP2-201ENST00000618187 1444 ntBASIC5.3□□□□□ -1.56
PDGFBP01127 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFBP01127 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.29□□□□□ -1.56
PDGFBP01127 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC022164.1-201ENST00000568767 2673 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDGFBP01127 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDGFBP01127 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 AL121886.1-201ENST00000358609 435 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDGFBP01127 U3.23-201ENST00000391132 200 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 RNA5SP113-201ENST00000410486 84 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 CYP4F29P-201ENST00000420685 446 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 C1DP3-201ENST00000455013 423 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 AK4P6-201ENST00000505168 528 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 MRPS33P2-201ENST00000507850 322 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.29□□□□□ -1.56
PDGFBP01127 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.29□□□□□ -1.56
PDGFBP01127 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFBP01127 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC090953.1-201ENST00000604305 1092 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 AL391358.1-201ENST00000605342 190 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 NANOGP3-201ENST00000605855 286 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 MLECP1-201ENST00000615893 709 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFBP01127 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFBP01127 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFBP01127 AC114876.1-201ENST00000490962 1366 ntBASIC5.29□□□□□ -1.56
PDGFBP01127 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 RN7SKP114-201ENST00000410327 279 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 RNF10P1-201ENST00000418589 369 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 KNOP1P3-201ENST00000446933 426 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 AL445687.2-201ENST00000458156 728 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 ATP5LP5-201ENST00000483050 299 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 RN7SL244P-201ENST00000493405 297 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFBP01127 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 HMGB1P23-201ENST00000518743 568 ntBASIC5.28□□□□□ -1.56
PDGFBP01127 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFBP01127 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms