Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL596275.2-204ENST00000641628 552 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AL596275.2-206ENST00000641957 626 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 AL512283.1-201ENST00000606756 1384 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC063976.2-201ENST00000425667 3556 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 AP001002.1-201ENST00000625148 1513 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 MT-RNR2-201ENST00000387347 1559 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 RNA5SP122-201ENST00000384457 108 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 RNA5SP284-201ENST00000384547 118 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLPTM1O96005 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 OR7E101P-201ENST00000400428 513 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 RPS3AP2-201ENST00000407190 754 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AL357752.1-201ENST00000412817 349 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 EIF4A1P1-201ENST00000420241 934 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 BX119321.1-201ENST00000428912 797 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 MTND4LP14-201ENST00000429447 288 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 HMGB3P24-201ENST00000433260 622 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 MRPS33P4-201ENST00000434892 317 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 RPL36AP39-201ENST00000445859 318 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 VN1R48P-201ENST00000448149 1036 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AL445665.1-202ENST00000452436 324 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLPTM1O96005 CYCSP34-201ENST00000458172 304 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 RPL21P6-201ENST00000479171 504 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 NENFP3-201ENST00000503735 313 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.97□□□□□ -1.61
CLPTM1O96005 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 RN7SKP34-201ENST00000516142 244 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AC139365.2-201ENST00000517972 253 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AC107918.3-201ENST00000533272 382 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 CD24P2-201ENST00000565486 219 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC026124.2-201ENST00000621847 656 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 AC022919.1-201ENST00000624979 626 ntBASIC4.97□□□□□ -1.61
CLPTM1O96005 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.97□□□□□ -1.61
CLPTM1O96005 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLPTM1O96005 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.97□□□□□ -1.61
CLPTM1O96005 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLPTM1O96005 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CLPTM1O96005 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLPTM1O96005 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 TMSB4XP4-201ENST00000323496 618 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 MIR375-201ENST00000362103 64 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 RNU6-1331P-201ENST00000363658 106 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 SNORA27.3-201ENST00000364937 134 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CLPTM1O96005 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AL031985.1-201ENST00000392713 418 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AL009179.1-201ENST00000406085 265 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.96□□□□□ -1.62
CLPTM1O96005 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AK4P4-201ENST00000419465 646 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AL358176.3-201ENST00000420757 454 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 SEC63P1-201ENST00000425785 1258 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms