Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 RNU6-353P-201ENST00000364266 108 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 MIR513B-201ENST00000385136 84 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL357752.1-201ENST00000412817 349 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 VPS26BP1-201ENST00000417155 755 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 MTCO2P21-201ENST00000419780 677 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 RPL12P28-201ENST00000430852 489 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 AL590399.4-201ENST00000436561 601 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 NANOGP9-201ENST00000439890 892 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 ATP5LP2-201ENST00000440646 311 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 MEMO1P4-201ENST00000453590 386 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 OR2AF1P-201ENST00000454899 889 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL133244.1-201ENST00000456007 258 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 CDC42P1-201ENST00000456658 548 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 NAP1L1P3-201ENST00000462291 880 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AC005165.2-201ENST00000466070 380 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 RPS7P6-201ENST00000485777 579 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 MTCYBP35-201ENST00000503630 1137 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 BOLA3P3-201ENST00000505182 232 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AC008565.1-201ENST00000509046 885 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.7□□□□□ -1.5
PHGDHO43175 IGKV2D-10-201ENST00000520194 281 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 DUXAP5-201ENST00000529668 529 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.7□□□□□ -1.5
PHGDHO43175 POLR2KP1-201ENST00000553226 168 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC006530.1-201ENST00000555980 571 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 RPA2P1-201ENST00000556557 721 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.7□□□□□ -1.5
PHGDHO43175 ZNF92P3-201ENST00000596594 954 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 GAS5-AS1-201ENST00000602767 694 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AL583832.1-201ENST00000603227 784 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.7□□□□□ -1.5
PHGDHO43175 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 AC090897.3-201ENST00000636973 1157 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 AC093225.1-201ENST00000506867 1408 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 RBPJP2-201ENST00000618187 1444 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 AP005435.3-201ENST00000531260 3198 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
PHGDHO43175 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHGDHO43175 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
PHGDHO43175 AL137100.1-201ENST00000556703 1620 ntBASIC5.7□□□□□ -1.5
PHGDHO43175 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PHGDHO43175 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 AC005005.4-201ENST00000623789 16698 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
PHGDHO43175 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.69□□□□□ -1.5
PHGDHO43175 MIR130A-201ENST00000385274 89 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC096921.1-201ENST00000411661 375 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 RNGTTP1-201ENST00000420965 728 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC138761.5-201ENST00000433967 325 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC002542.1-201ENST00000440683 193 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 HMGB3P6-201ENST00000444896 598 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 CASP3P1-201ENST00000446037 609 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC104339.1-201ENST00000465478 348 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 RPL23AP37-201ENST00000479658 549 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC099521.1-201ENST00000482557 334 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 RN7SL57P-201ENST00000493687 290 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 RN7SL649P-201ENST00000496974 275 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 HSD3BP3-201ENST00000514706 994 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC139365.2-201ENST00000517972 253 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC023538.1-201ENST00000534576 736 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AP002373.2-201ENST00000541631 1060 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms