Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SL820P-201ENST00000616437 299 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 IFIT1P1-201ENST00000400497 1449 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 AC018555.1-201ENST00000567548 1980 ntBASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHKB-CPT1BH3BT56 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RNA5SP308-201ENST00000362532 115 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RNU1-87P-201ENST00000363727 170 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RNA5SP433-201ENST00000364491 114 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 MIR614-201ENST00000385082 90 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AL157702.1-201ENST00000398764 426 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 PRELID1P1-201ENST00000403549 660 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RN7SKP29-201ENST00000410957 272 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 PA2G4P6-201ENST00000438325 1197 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 PTMAP6-201ENST00000439110 327 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ATP5LP2-201ENST00000440646 311 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ANP32BP2-201ENST00000454525 545 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RPS20P23-201ENST00000461683 354 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC100832.1-201ENST00000471945 383 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006499.6-201ENST00000511169 607 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 USP9YP5-201ENST00000511770 630 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 OSTC-204ENST00000512478 663 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 RNA5SP309-201ENST00000516670 106 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 OR11H3P-201ENST00000554547 982 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC010547.7-201ENST00000570323 333 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 MYLK-221ENST00000583087 678 ntTSL 4 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 HMGB2P1-201ENST00000591146 634 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC036176.3-201ENST00000602456 418 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC005252.1-201ENST00000604518 1063 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 COX6CP4-201ENST00000605798 228 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC079395.2-201ENST00000610982 737 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC243830.3-201ENST00000616810 376 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC135068.5-201ENST00000624197 983 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 AC073862.2-201ENST00000625114 701 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 YES1P1-201ENST00000418510 1628 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ERCC6-202ENST00000374127 1782 ntBASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
CHKB-CPT1BH3BT56 HSPA8P1-201ENST00000425843 1833 ntBASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 AP000756.2-201ENST00000624168 2567 ntBASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 AC017007.4-201ENST00000503353 1352 ntBASIC2.65□□□□□ -1.98
CHKB-CPT1BH3BT56 AC006210.2-201ENST00000367074 1545 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR423-201ENST00000362201 94 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms