Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 GAPDHP24-201ENST00000328713 983 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 SNORA21-201ENST00000362423 132 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 RNU5F-7P-201ENST00000363696 115 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 Y_RNA.302-201ENST00000364997 102 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 RPL9P21-201ENST00000392269 505 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 HMGB3P7-201ENST00000400214 611 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 CYCSP45-201ENST00000402289 315 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AL133264.1-201ENST00000407157 562 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 MIR1284-201ENST00000408337 120 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 PIGPP2-201ENST00000411569 458 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 PCBP2P1-201ENST00000437262 977 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 SUMO2P3-201ENST00000438311 288 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 TRIM60P18-201ENST00000441518 828 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC002553.3-201ENST00000453002 341 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 MTND6P8-201ENST00000503471 522 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 NDUFA5P12-201ENST00000503796 343 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 COX6B1P6-201ENST00000522347 255 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 PCMTD1P2-201ENST00000565017 355 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC091805.2-201ENST00000603848 235 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AL109618.2-201ENST00000605527 211 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 MIR6793-201ENST00000612376 63 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 Z99129.1-201ENST00000612510 255 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 MKKS-204ENST00000639674 192 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC007993.1-201ENST00000621298 2430 ntBASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TMEM88BA6NKF7 AC125238.2-201ENST00000430003 1440 ntBASIC7.52□□□□□ -1.2
TMEM88BA6NKF7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
TMEM88BA6NKF7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.52□□□□□ -1.2
TMEM88BA6NKF7 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 RNU6-225P-201ENST00000384613 103 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 OR6C69P-201ENST00000394268 893 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 RPS27AP15-201ENST00000447672 466 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 RN7SL466P-201ENST00000497546 295 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CDH12P4-201ENST00000517835 295 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CDH12P3-201ENST00000517935 295 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 CDH12P1-201ENST00000518435 295 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC027026.1-201ENST00000532323 742 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 ZNF519P3-201ENST00000557158 1032 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 MIR1269B-201ENST00000580405 75 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC104695.2-201ENST00000605056 775 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AP002360.4-201ENST00000606980 481 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC008498.1-201ENST00000613012 531 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC026368.1-201ENST00000614934 690 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 MIR7155-201ENST00000615925 56 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC092650.2-201ENST00000619984 902 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC116667.2-201ENST00000641075 823 ntBASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.52□□□□□ -1.21
TMEM88BA6NKF7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms