Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC011447.7-201ENST00000624228 1590 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 U3.30-201ENST00000391308 210 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 RPS29P33-201ENST00000456717 146 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC011005.3-201ENST00000491624 395 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 MYL12BP2-201ENST00000503948 512 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 MIR6780A-201ENST00000615089 68 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 FRG1EP-201ENST00000634469 770 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AC112198.2-201ENST00000426589 6996 ntBASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.25□□□□□ -1.57
SMIM28A0A1B0GU29 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 SNORA56-201ENST00000383966 129 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC019050.1-201ENST00000418508 492 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC013429.2-201ENST00000418798 781 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AL121578.1-201ENST00000428051 892 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC005154.2-201ENST00000438110 379 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 RPS5P7-201ENST00000456664 608 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 RN7SL517P-201ENST00000462240 305 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 IGKV1-32-201ENST00000519290 311 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 CR383656.6-201ENST00000550518 394 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC006349.1-201ENST00000555526 235 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC022726.1-201ENST00000587475 207 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 FAM27B-201ENST00000610601 213 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 uc_338.18-201ENST00000615451 175 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 MIR7703-201ENST00000620784 77 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 NLRP3P1-201ENST00000622303 1785 ntBASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
SMIM28A0A1B0GU29 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC079741.1-201ENST00000321498 212 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 SNORA5.1-201ENST00000384275 131 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 RN7SKP216-201ENST00000411050 312 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 RSU1P3-201ENST00000412878 835 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL645608.4-201ENST00000423619 154 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 CEACAMP9-201ENST00000442990 513 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL513533.1-201ENST00000453728 415 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC093166.2-201ENST00000455969 1017 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC006967.1-201ENST00000467608 589 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC073073.1-201ENST00000493920 463 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC008897.1-201ENST00000494006 347 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms