Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA17.5-201ENST00000630429 132 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 AP000547.3-204ENST00000588548 2523 ntBASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL4A3BPQ9Y5P4 KYNUP3-201ENST00000574386 1341 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 TMSB4XP4-201ENST00000323496 618 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC021876.1-201ENST00000425959 359 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC096775.1-201ENST00000437724 448 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC093166.4-201ENST00000457867 318 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 RNU1-88P-201ENST00000459274 128 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL161747.1-201ENST00000480068 358 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 HPRT1P1-201ENST00000509498 657 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 SNORA70.20-201ENST00000516848 126 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 HMGN2P36-201ENST00000529541 409 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL121594.2-201ENST00000541658 472 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC091078.2-201ENST00000557145 559 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL163952.1-202ENST00000569625 600 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC013244.3-201ENST00000605614 388 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL157392.4-201ENST00000609756 345 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC063944.3-201ENST00000609969 533 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC109454.4-201ENST00000623411 649 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC008993.2-201ENST00000631744 806 ntBASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
COL4A3BPQ9Y5P4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC046144.1-201ENST00000478559 1853 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 MIR375-201ENST00000362103 64 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 RN7SKP69-201ENST00000365390 305 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 RNU1-74P-201ENST00000384108 171 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 Y_RNA.578-201ENST00000390903 88 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 RPS3AP25-201ENST00000411660 793 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 GSTM3P2-201ENST00000412746 530 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 DEFA9P-201ENST00000433042 285 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 MTCYBP15-201ENST00000433123 1127 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL161636.2-201ENST00000445179 927 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms