Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DEFA11P-201ENST00000446470 261 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC026336.1-201ENST00000466577 351 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 FAM172BP-201ENST00000487497 1089 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SCARNA6.1-201ENST00000516989 238 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SAA3P-201ENST00000533267 365 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL121821.2-201ENST00000556081 394 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL157394.1-201ENST00000562983 1224 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 H3F3BP2-201ENST00000583907 357 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC011891.2-201ENST00000604949 397 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL050343.2-201ENST00000607338 280 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 OR6L2P-201ENST00000608207 925 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AL161734.1-201ENST00000609720 557 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC135050.6-202ENST00000613584 392 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC243830.2-201ENST00000618067 630 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 AC022743.1-201ENST00000624990 664 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MIR193BHG-214ENST00000641765 509 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 MAPK10-365ENST00000641902 3825 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 PRNCR1-201ENST00000635449 12727 ntBASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
PCDHGA11Q9Y5H2 SPATA31C2-201ENST00000324915 3777 ntBASIC7.09□□□□□ -1.28
PCDHGA11Q9Y5H2 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
PCDHGA11Q9Y5H2 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
PCDHGA11Q9Y5H2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC090017.1-201ENST00000548612 1779 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC005839.1-201ENST00000624148 3213 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC092821.3-202ENST00000641304 2767 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-845P-201ENST00000362578 103 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RNA5SP448-201ENST00000363151 111 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU6-1322P-201ENST00000364309 107 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RNA5SP238-201ENST00000365464 120 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 GEMIN2P2-201ENST00000418195 715 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL593856.1-201ENST00000419949 805 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC133104.1-201ENST00000429100 218 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 HBBP1-201ENST00000433329 439 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC007790.1-201ENST00000439081 782 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 SDCBPP1-201ENST00000440192 890 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC108039.2-201ENST00000440214 359 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 MTCO1P27-201ENST00000448269 226 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC132479.1-201ENST00000449160 144 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 OR7E62P-201ENST00000456741 477 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL7AP52-201ENST00000458096 790 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS20P20-201ENST00000460498 340 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL23AP71-201ENST00000470966 469 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL161747.1-201ENST00000480068 358 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC055733.3-201ENST00000505214 523 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC106800.2-201ENST00000514009 1103 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC138866.1-201ENST00000514522 497 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL10P18-201ENST00000519384 309 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AP000790.1-201ENST00000528891 737 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 OR7E1P-201ENST00000533891 958 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms