Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 RN7SL629P-201ENST00000489622 285 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 OR9N1P-201ENST00000491296 333 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC090022.1-201ENST00000546569 311 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC005244.1-201ENST00000582566 339 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC025811.1-201ENST00000604312 472 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AL121652.1-201ENST00000608851 448 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC093783.1-201ENST00000612976 329 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC068880.4-201ENST00000623082 495 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AL078595.3-201ENST00000623815 1166 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 OR11H2-202ENST00000641517 1085 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 AC068870.1-201ENST00000563737 2455 ntBASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHGB1Q9Y5G3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 SEPT7P7-201ENST00000420492 1301 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AL731566.1-201ENST00000620490 1937 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RNA5SP110-201ENST00000362638 115 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RNU6-792P-201ENST00000363490 107 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AMZ2P2-201ENST00000406819 1057 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 NIFKP3-201ENST00000417799 865 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC092570.3-201ENST00000420113 693 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC013268.2-201ENST00000420753 337 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RCC2P2-201ENST00000422174 918 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 HSPE1P16-201ENST00000426640 348 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 NANOGP4-201ENST00000427230 913 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RPL7P56-201ENST00000429441 717 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 OR52Y1P-201ENST00000452418 828 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 OR5H7P-201ENST00000514084 930 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 MTCO3P27-201ENST00000514397 196 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RNA5SP271-201ENST00000516700 88 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RNU6-334P-201ENST00000517072 102 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC100784.1-201ENST00000522790 310 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC027544.3-201ENST00000535082 757 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC092332.1-201ENST00000563684 829 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC068620.3-201ENST00000602749 560 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC108738.1-201ENST00000603703 237 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AC098935.2-201ENST00000604222 466 ntBASIC5.06□□□□□ -1.6
PCDHGB1Q9Y5G3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms