Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC078899.3-201ENST00000599065 212 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AL591167.1-201ENST00000607321 456 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 ENO1P4-201ENST00000416471 1785 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 AC020978.8-201ENST00000571975 3022 ntBASIC7.89□□□□□ -1.15
VPS9D1Q9Y2B5 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 BRD7P1-201ENST00000557705 1915 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AL731566.1-201ENST00000620490 1937 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-522P-201ENST00000364497 107 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 Y_RNA.270-201ENST00000364693 104 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RNU4-66P-201ENST00000365199 138 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AL080285.1-201ENST00000404225 984 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 BMP2KL-201ENST00000414251 1225 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AL451074.5-201ENST00000415894 435 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 HMGB3P11-201ENST00000440127 604 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 DYNLT3P2-201ENST00000442517 295 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 OSTCP8-201ENST00000445117 448 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 UBFD1P1-201ENST00000473259 814 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC058823.1-201ENST00000485315 474 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RPS27P27-201ENST00000498779 255 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC116655.1-201ENST00000508324 901 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC095059.2-201ENST00000510601 933 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 MTND1P19-201ENST00000511780 315 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC006499.2-201ENST00000513470 337 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC090572.1-201ENST00000519251 160 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC027309.2-201ENST00000520566 192 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC091175.1-201ENST00000522168 572 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AP005435.4-201ENST00000529514 284 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC005230.1-201ENST00000555418 285 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC009997.1-201ENST00000557862 129 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 DNM1P33-201ENST00000565222 270 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 MIR3714-201ENST00000579507 65 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AP005119.1-201ENST00000580956 292 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC098657.3-201ENST00000620434 263 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AP000356.4-201ENST00000639500 172 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AURKA-201ENST00000312783 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC095038.1-201ENST00000429248 1591 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 AC087501.5-201ENST00000607496 2374 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms