Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SCN11AQ9UI33 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 SAMM50P1-201ENST00000455403 1399 ntBASIC6.21□□□□□ -1.41
SCN11AQ9UI33 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 AGGF1P9-201ENST00000561884 913 ntBASIC6.21□□□□□ -1.41
SCN11AQ9UI33 RPL12P25-202ENST00000598100 674 ntBASIC6.21□□□□□ -1.41
SCN11AQ9UI33 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.21□□□□□ -1.41
SCN11AQ9UI33 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 RPS21P8-201ENST00000413365 247 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AC004975.1-201ENST00000428733 208 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 CBX1P1-201ENST00000440184 427 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 RN7SL517P-201ENST00000462240 305 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AC091868.1-201ENST00000508746 304 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AL109618.2-201ENST00000605527 211 ntBASIC6.21□□□□□ -1.42
SCN11AQ9UI33 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.21□□□□□ -1.42
SCN11AQ9UI33 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AL669831.5-218ENST00000591702 1873 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 TRIM51GP-201ENST00000534741 1350 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AC108463.1-201ENST00000450258 347 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 RN7SKP92-201ENST00000517266 244 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AC138701.1-201ENST00000524329 714 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AP001781.1-201ENST00000530977 207 ntBASIC6.2□□□□□ -1.42
SCN11AQ9UI33 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.2□□□□□ -1.42
SCN11AQ9UI33 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC092451.3-201ENST00000625067 1343 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 RPS17P8-201ENST00000434525 335 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC007016.1-201ENST00000512110 244 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC093249.4-201ENST00000564755 259 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 AC020915.5-201ENST00000596836 964 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 BX005214.3-202ENST00000619809 325 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SCN11AQ9UI33 DHX9P1-201ENST00000436565 3076 ntBASIC6.19□□□□□ -1.42
SCN11AQ9UI33 MIR298-201ENST00000401212 88 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 snoU13.1-201ENST00000459157 104 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC011276.1-201ENST00000469688 323 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms