Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC037198.3-201ENST00000616754 526 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 LINC01739-205ENST00000641890 573 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 RNU6-354P-201ENST00000383862 107 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 RNU6-610P-201ENST00000384264 107 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AL034403.1-201ENST00000399414 885 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 HMGB3P19-201ENST00000403971 560 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 MTCO1P43-201ENST00000431831 488 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC006994.1-201ENST00000438212 839 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 snoU13.29-201ENST00000459370 104 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 snoU109.3-201ENST00000459477 145 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 CYCSP20-201ENST00000473154 315 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 CBX1P5-201ENST00000475330 559 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 RPL7AP6-201ENST00000477943 801 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 OR5H3P-201ENST00000502817 919 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 RPS4XP20-201ENST00000505751 772 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 OR8X1P-201ENST00000534542 869 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 DUX4L52-201ENST00000549363 777 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 SNORD39.2-201ENST00000579995 76 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 RN7SL356P-201ENST00000582228 248 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC006116.3-201ENST00000592968 361 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC024940.4-201ENST00000605507 246 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC063944.3-201ENST00000609969 533 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AL121612.2-201ENST00000612261 482 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC090510.2-201ENST00000617465 629 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC241377.1-201ENST00000619797 406 ntBASIC6.09□□□□□ -1.43
COL20A1Q9P218 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL20A1Q9P218 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.09□□□□□ -1.43
COL20A1Q9P218 AC009962.1-201ENST00000567327 3813 ntBASIC6.09□□□□□ -1.44
COL20A1Q9P218 AC106754.1-201ENST00000562632 1513 ntBASIC6.09□□□□□ -1.44
COL20A1Q9P218 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.44
COL20A1Q9P218 AC100757.1-201ENST00000616872 1835 ntBASIC6.09□□□□□ -1.44
COL20A1Q9P218 AC007342.5-201ENST00000571340 2142 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AL034549.2-201ENST00000618285 3373 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 SNORD56.6-201ENST00000384569 71 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 PPIAP9-201ENST00000403866 498 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 RN7SKP213-201ENST00000410746 298 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 MTCYBP12-201ENST00000440559 1134 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 RPS27P5-201ENST00000444247 244 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC023512.1-201ENST00000444513 499 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms