Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 AC025470.1-201ENST00000510053 2032 ntBASIC6.42□□□□□ -1.38
VTA1Q9NP79 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTA1Q9NP79 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VTA1Q9NP79 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC087516.1-201ENST00000561236 2428 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 C4BPAP1-201ENST00000415474 1893 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 RNU6-906P-201ENST00000384700 70 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 MIR130A-201ENST00000385274 89 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 GAPDHP15-201ENST00000398586 975 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 DNAJC19P6-201ENST00000401853 280 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 MTCO2P31-201ENST00000402702 684 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AP000357.1-201ENST00000409926 1165 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC107081.1-201ENST00000414975 361 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 SETP8-201ENST00000435341 628 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL590399.4-201ENST00000436561 601 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC006335.2-201ENST00000437993 330 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC097499.1-201ENST00000444277 208 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 RPL34P26-201ENST00000445636 354 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 REG1CP-206ENST00000447469 496 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 RPL7P45-201ENST00000455851 743 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 RN7SL51P-201ENST00000468230 285 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 RPS4XP6-201ENST00000477670 797 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 RPL7P39-201ENST00000481157 744 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC079203.1-201ENST00000487972 404 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC024558.1-201ENST00000505008 528 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC093815.1-201ENST00000508637 280 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC109635.6-201ENST00000525487 1113 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 OR4A6P-201ENST00000534364 970 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL512329.2-201ENST00000607350 548 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC097478.2-201ENST00000610572 514 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AC079776.5-201ENST00000641920 211 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL121950.1-201ENST00000624993 2077 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 AL355578.1-201ENST00000607405 1328 ntBASIC6.41□□□□□ -1.38
VTA1Q9NP79 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTA1Q9NP79 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.41□□□□□ -1.38
VTA1Q9NP79 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VTA1Q9NP79 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTA1Q9NP79 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
VTA1Q9NP79 RNY3P9-201ENST00000384727 106 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AL360271.1-201ENST00000395679 510 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 RPL23AP59-201ENST00000399415 461 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC119751.3-201ENST00000399720 670 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC233289.1-201ENST00000403700 508 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AL590806.1-201ENST00000415818 853 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 RPL22P18-201ENST00000417197 377 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 CYCSP12-201ENST00000437729 300 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 CR769776.1-201ENST00000441254 787 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms