Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 RNU1-136P-201ENST00000384181 164 ntBASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHD8Q9HCK8 MAPK10-270ENST00000641102 3538 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 RN7SKP74-201ENST00000362849 309 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 RNA5SP22-201ENST00000365393 109 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 ACTR3P2-201ENST00000439585 1257 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 HMGB1P4-201ENST00000455362 567 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 RPL7P9-201ENST00000468715 747 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 AC122688.1-201ENST00000541494 223 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 AC005000.2-201ENST00000605468 310 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 AL353763.1-201ENST00000624467 1628 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.65□□□□□ -1.66
CHD8Q9HCK8 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CHD8Q9HCK8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 MIR218-2-201ENST00000385006 110 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 AC079080.1-201ENST00000479841 822 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 DHFRP1-201ENST00000579682 559 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 BDH2P1-201ENST00000602288 736 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 MIR6867-201ENST00000610636 67 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 CCDC162P-202ENST00000368966 6751 ntBASIC4.65□□□□□ -1.67
CHD8Q9HCK8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHD8Q9HCK8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 RPL7AP25-201ENST00000423357 805 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AL161722.2-201ENST00000434731 981 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 TCEA1P3-201ENST00000443005 880 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AC007967.1-201ENST00000455422 1159 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 RPS27AP16-201ENST00000492222 470 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 NPM1P6-201ENST00000521088 871 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AC019176.2-201ENST00000611579 315 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AL391261.4-201ENST00000616012 481 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 PPIAP31-201ENST00000405422 495 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 CYCSP11-201ENST00000436426 315 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 NOP56P2-201ENST00000447491 769 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 TCEA1P1-201ENST00000449716 880 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 IGHV5-78-201ENST00000450948 295 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms