Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 HSPA8P15-201ENST00000401676 786 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AMZ2P2-201ENST00000406819 1057 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 NPM1P4-201ENST00000414095 812 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MARK2P12-201ENST00000420129 585 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC023141.6-201ENST00000429418 337 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 RPS11P7-201ENST00000442125 465 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 TXNP2-201ENST00000443918 295 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC104634.1-201ENST00000452720 462 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 RN7SL189P-201ENST00000468631 289 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC104629.1-201ENST00000494226 508 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 OR4V1P-201ENST00000525394 1140 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 FKBP1AP1-201ENST00000594588 318 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL671309.1-201ENST00000603750 544 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL139022.2-201ENST00000606934 443 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MIR6729-201ENST00000618194 65 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MIR6837-201ENST00000620884 64 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC136428.4-201ENST00000634254 1155 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC074101.1-201ENST00000637861 241 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 CUL4AP1-201ENST00000514750 1863 ntBASIC5.4□□□□□ -1.55
PCDH9Q9HC56 AC004817.4-201ENST00000602396 3625 ntBASIC5.4□□□□□ -1.55
PCDH9Q9HC56 NAMPTP1-201ENST00000440465 2514 ntBASIC5.4□□□□□ -1.55
PCDH9Q9HC56 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH9Q9HC56 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 RNU6-697P-201ENST00000363348 107 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC092642.1-201ENST00000392417 425 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC098592.2-201ENST00000413158 265 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC007738.1-201ENST00000413892 348 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 NPM1P26-201ENST00000426339 738 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 FAM96AP1-201ENST00000430879 482 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 RPL7L1P9-201ENST00000431298 745 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AL161722.2-201ENST00000434731 981 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AL158053.1-201ENST00000441503 453 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 RPS26P41-201ENST00000450370 284 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC108161.1-201ENST00000461060 402 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 PCNAP1-201ENST00000505363 709 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AP000859.1-201ENST00000525536 307 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 RPL10P14-201ENST00000565265 298 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 AL355802.4-201ENST00000607635 548 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 CASC19-264ENST00000641912 1184 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 TCP11X1-202ENST00000622971 1372 ntBASIC5.39□□□□□ -1.55
PCDH9Q9HC56 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDH9Q9HC56 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms