Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 MFSD8-236ENST00000641509 4050 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 RPS27AP11-201ENST00000402798 447 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AC053481.4-201ENST00000583164 216 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AC010478.1-201ENST00000601500 6762 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 MIR554-201ENST00000384874 96 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LRRC37BP1-201ENST00000398851 714 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 RN7SL652P-201ENST00000577769 300 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AC019206.1-201ENST00000621938 425 ntBASIC4.64□□□□□ -1.67
VPS13AQ96RL7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS13AQ96RL7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RPL37P1-201ENST00000432310 284 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC008481.1-201ENST00000463278 396 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AGGF1P6-201ENST00000569213 976 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC006116.5-201ENST00000591936 559 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 GNG5P2-201ENST00000372054 207 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 PTMAP2-201ENST00000397627 327 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 MTND4LP2-201ENST00000502312 285 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 MIR4301-201ENST00000577203 66 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RNU6-628P-201ENST00000410675 107 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC018644.1-201ENST00000429934 551 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC053481.1-201ENST00000467217 306 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 RN7SL691P-201ENST00000494487 301 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC022360.1-201ENST00000521058 340 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 MIR4286-201ENST00000580651 93 ntBASIC4.63□□□□□ -1.67
VPS13AQ96RL7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13AQ96RL7 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 TBCAP2-201ENST00000416175 326 ntBASIC4.62□□□□□ -1.67
VPS13AQ96RL7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 snoU109.5-201ENST00000516231 132 ntBASIC4.62□□□□□ -1.67
VPS13AQ96RL7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS13AQ96RL7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms