Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL389925.1-201ENST00000432257 728 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC093716.1-201ENST00000435923 377 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC015983.1-201ENST00000441577 373 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL161722.1-201ENST00000446972 1032 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 ACA64.4-201ENST00000459070 127 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 RPS20P4-201ENST00000461659 355 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC083795.1-201ENST00000491760 320 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC010486.2-201ENST00000505572 483 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC010486.3-201ENST00000511602 785 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC108120.2-201ENST00000512973 294 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL109741.3-201ENST00000561748 592 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC007346.1-201ENST00000569208 867 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 ZNF92P3-201ENST00000596594 954 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL138895.2-201ENST00000603019 178 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC005252.1-201ENST00000604518 1063 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL645933.2-201ENST00000606743 1207 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC007786.3-201ENST00000615154 596 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC024884.1-201ENST00000620583 399 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL512506.2-201ENST00000624472 458 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 AL121594.5-201ENST00000631724 573 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.36□□□□□ -1.55
SNX18Q96RF0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SNX18Q96RF0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX18Q96RF0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 EIF3EP1-201ENST00000433978 1316 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 RN7SKP145-201ENST00000363291 303 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AL021331.1-201ENST00000402817 582 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC023128.2-201ENST00000420880 1223 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 NMD3P2-201ENST00000421815 761 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 HSPE1P16-201ENST00000426640 348 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 UBE2V1P1-201ENST00000430836 445 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 CBX1P2-201ENST00000453841 458 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC009963.3-201ENST00000458090 486 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC094085.1-201ENST00000468914 584 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC079080.1-201ENST00000479841 822 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 OR11I1P-201ENST00000486033 954 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 RPL12P30-201ENST00000488389 499 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 PDCL3P4-201ENST00000489621 720 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 RN7SKP34-201ENST00000516142 244 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 RN7SKP288-201ENST00000516227 268 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 Y_RNA.688-201ENST00000516565 95 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX18Q96RF0 OR8A2P-201ENST00000528631 952 ntBASIC5.35□□□□□ -1.55
SNX18Q96RF0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX18Q96RF0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms