Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 RN7SKP147-201ENST00000517154 244 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AP002884.5-201ENST00000595053 1132 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC096586.2-201ENST00000610260 441 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 MIR7155-201ENST00000615925 56 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC026367.3-201ENST00000619032 590 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 THAP12P4-201ENST00000528321 2266 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC093775.1-201ENST00000624154 1868 ntBASIC5.28□□□□□ -1.56
RPRD1AQ96P16 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.28□□□□□ -1.56
RPRD1AQ96P16 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 NXF4-202ENST00000416098 1465 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 RNU4-4P-201ENST00000364588 130 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 RNA5SP455-201ENST00000365190 119 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AL353625.1-202ENST00000366273 571 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 RNU6-729P-201ENST00000384399 107 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 BRWD1P3-201ENST00000428816 390 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC009238.2-201ENST00000431026 355 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC004453.1-201ENST00000487895 408 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 OR8A2P-201ENST00000528631 952 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC022884.2-201ENST00000578535 580 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC007448.1-201ENST00000582714 234 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AL137246.1-201ENST00000607072 977 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AP005432.2-201ENST00000608162 586 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC008833.1-201ENST00000611633 691 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 CASC19-281ENST00000642118 1554 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 MAPK10-328ENST00000641553 4009 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC092376.2-201ENST00000622621 4116 ntBASIC5.27□□□□□ -1.57
RPRD1AQ96P16 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RPRD1AQ96P16 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 CUL4AP1-201ENST00000514750 1863 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AL645927.1-201ENST00000396783 406 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 GAPDHP15-201ENST00000398586 975 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 RN7SKP97-201ENST00000410966 333 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 RPL12P9-201ENST00000412942 488 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LYPLA1P1-201ENST00000434514 622 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 KNOP1P3-201ENST00000446933 426 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 NDUFA5P8-201ENST00000449019 346 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC002553.2-201ENST00000453217 340 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 RPL32P9-201ENST00000487963 407 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 RN7SL591P-201ENST00000496150 292 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 USP9YP2-201ENST00000504503 1000 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 USP9YP1-201ENST00000513521 1002 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms