Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC010385.1-201ENST00000412374 256 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 LIPT1P1-201ENST00000415870 1186 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC093155.2-201ENST00000420734 937 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 OR6K4P-201ENST00000423179 955 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 RPL34P26-201ENST00000445636 354 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RPL36AP39-201ENST00000445859 318 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AL596266.1-201ENST00000448132 400 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AL031313.1-201ENST00000448435 256 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 Z95152.1-201ENST00000453556 656 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-599P-201ENST00000459383 107 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-1193P-201ENST00000459461 107 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC087672.1-201ENST00000479876 766 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-615P-201ENST00000516065 106 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 MIR4311-201ENST00000580794 100 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AC008521.2-201ENST00000591021 259 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.19□□□□□ -1.42
HPS3Q969F9 Z82195.1-201ENST00000604558 398 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 AC025574.2-201ENST00000615621 514 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-368P-201ENST00000620928 107 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-538P-201ENST00000622329 107 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC073869.7-201ENST00000640874 297 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC119674.1-212ENST00000641155 993 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 OR4F13P-202ENST00000560066 2054 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.19□□□□□ -1.42
HPS3Q969F9 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 MTCO1P18-201ENST00000455518 1419 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL121950.1-201ENST00000624993 2077 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 RNU6-729P-201ENST00000384399 107 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HPS3Q969F9 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HPS3Q969F9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 SNORA11B-201ENST00000408175 129 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 RN7SKP206-201ENST00000410823 293 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL354868.1-201ENST00000417077 482 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC005297.1-201ENST00000444765 862 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AL445665.1-202ENST00000452436 324 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 PSMC1P13-201ENST00000458195 985 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 RN7SL72P-201ENST00000460697 269 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC091544.1-201ENST00000484702 348 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AC138866.2-201ENST00000508650 584 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC147055.3-201ENST00000510547 851 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.18□□□□□ -1.42
HPS3Q969F9 SNORA19.3-201ENST00000516165 130 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC011611.5-201ENST00000552477 578 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL109741.3-201ENST00000561748 592 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.18□□□□□ -1.42
HPS3Q969F9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms