Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC024940.3-201ENST00000538551 316 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC007225.2-201ENST00000562529 256 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AL137246.1-201ENST00000607072 977 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AL451049.1-201ENST00000608672 497 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AP000864.1-201ENST00000609424 650 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AP005131.7-201ENST00000610087 611 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC008115.4-201ENST00000619780 775 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 AC011493.1-201ENST00000596753 1632 ntBASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTN4IP1Q8WWV3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 SNORA2.3-201ENST00000383920 135 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 MIR600-201ENST00000385007 98 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC079355.1-201ENST00000421770 223 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 EI24P4-201ENST00000423683 1078 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 NPM1P22-201ENST00000427761 952 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AL606490.1-201ENST00000452266 765 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 RNU7-157P-201ENST00000459600 66 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC020890.1-201ENST00000491837 504 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 BTG4P1-201ENST00000510421 183 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 EIF4EP5-201ENST00000528228 640 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC005868.1-201ENST00000536421 331 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AL512310.9-201ENST00000553311 948 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 CYCSP40-201ENST00000575927 294 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC233702.9-201ENST00000581528 203 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AL512329.2-201ENST00000607350 548 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 SALL4P2-201ENST00000423288 2910 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 AC068446.1-201ENST00000556425 1549 ntBASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.2□□□□□ -1.74
RTN4IP1Q8WWV3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 SNORA17.1-201ENST00000362945 126 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 U3.2-201ENST00000362981 210 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 RN7SKP113-201ENST00000363891 295 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 MIR1286-201ENST00000408112 78 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 MIR1182-201ENST00000408363 97 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 OR52B5P-201ENST00000435337 951 ntBASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN4IP1Q8WWV3 AC090142.2-201ENST00000483263 416 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms