Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 SNORD56.4-201ENST00000363883 71 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 MIR137-201ENST00000385223 102 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 MIR765-201ENST00000390226 114 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-1320P-201ENST00000390838 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-1269P-201ENST00000391139 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-584P-201ENST00000410350 95 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 VN1R21P-201ENST00000426703 765 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 ARAFP2-201ENST00000440565 559 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC105399.1-202ENST00000447303 205 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-599P-201ENST00000459383 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-1193P-201ENST00000459461 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 PRELID3BP6-201ENST00000503839 571 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 SNORA31.13-201ENST00000516624 135 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 HIGD1AP18-201ENST00000520730 278 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AP001372.4-201ENST00000524889 472 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC022832.1-201ENST00000530718 645 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL121594.4-201ENST00000556211 1196 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RN7SL708P-201ENST00000580952 299 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC087763.1-201ENST00000603391 286 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL121652.1-201ENST00000608851 448 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 MIR6798-201ENST00000612887 67 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AL352984.2-202ENST00000613699 155 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RMST_10.1-201ENST00000616309 154 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-368P-201ENST00000620928 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 RNU6-538P-201ENST00000622329 107 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC009120.7-201ENST00000623452 780 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC026523.2-201ENST00000625039 7739 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 AC011493.1-201ENST00000596753 1632 ntBASIC5.59□□□□□ -1.52
HMGB4Q8WW32 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
HMGB4Q8WW32 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL360270.2-201ENST00000562952 5985 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 HSPD1P11-201ENST00000508643 1702 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 RNU6-207P-201ENST00000384137 107 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL645733.1-201ENST00000402250 217 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 ATF1P1-201ENST00000406040 927 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC008173.1-201ENST00000418901 264 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC241520.1-201ENST00000422654 1099 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC005033.1-201ENST00000428904 813 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC004854.1-201ENST00000440356 349 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 CEACAMP7-201ENST00000444105 496 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 RPS20P4-201ENST00000461659 355 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC091544.1-201ENST00000484702 348 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 TPT1P3-201ENST00000492841 512 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC078899.1-201ENST00000521432 1185 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms