Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SNED1Q8TER0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6□□□□□ -1.45
SNED1Q8TER0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SNED1Q8TER0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6□□□□□ -1.45
SNED1Q8TER0 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 SNORA70.10-201ENST00000384515 134 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 LRRC37BP1-201ENST00000398851 714 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 SEPT7P2-202ENST00000398921 823 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 TBCAP2-201ENST00000416175 326 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 NPM1P25-201ENST00000429734 854 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC016831.4-201ENST00000438302 307 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC008782.1-201ENST00000603386 430 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 OR56B2P-202ENST00000641377 2453 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 RNA5SP223-201ENST00000365174 120 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 AL390316.1-201ENST00000406279 553 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 U3.32-201ENST00000408116 212 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 RN7SKP16-201ENST00000410180 299 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 RPL7AP52-201ENST00000458096 790 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 RPL7AP10-201ENST00000481016 791 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC093824.1-201ENST00000508796 343 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 BUD31P1-201ENST00000521828 359 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC069366.1-201ENST00000583159 838 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC115286.1-201ENST00000604298 434 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 AC010424.2-201ENST00000607594 443 ntBASIC5.99□□□□□ -1.45
SNED1Q8TER0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.99□□□□□ -1.45
SNED1Q8TER0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SNED1Q8TER0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 ABCC13-202ENST00000463099 3842 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AL357515.1-201ENST00000402967 542 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 RPL12P9-201ENST00000412942 488 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 ATG4AP1-201ENST00000416893 538 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 GAPDHP49-201ENST00000421421 961 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC006065.1-201ENST00000422539 802 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 MRPS21P2-201ENST00000424704 264 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 SCAND3P1-201ENST00000439854 1060 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 AL691482.1-201ENST00000453255 87 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 SNORA70.11-201ENST00000515987 138 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 SNORA70.13-201ENST00000516116 138 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 BNIP3P5-201ENST00000562290 498 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 AC005191.1-201ENST00000603950 358 ntBASIC5.98□□□□□ -1.45
SNED1Q8TER0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
SNED1Q8TER0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNED1Q8TER0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 SMG1P6-201ENST00000532337 2930 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms