Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNA5SP455-201ENST00000365190 119 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 PPIAP9-201ENST00000403866 498 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 AL078595.1-201ENST00000404458 226 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AL365338.1-201ENST00000422282 858 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC073508.1-201ENST00000428866 656 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 MRPL50P1-201ENST00000431951 384 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 RRM2P4-201ENST00000441721 562 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 LINC02210-201ENST00000444561 288 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 NDUFA5P9-201ENST00000472609 340 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 RN7SL481P-201ENST00000477764 299 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC008897.1-201ENST00000494006 347 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 GTF2F2P1-201ENST00000511083 675 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 RAB9BP1-201ENST00000519581 626 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC011487.3-201ENST00000593607 453 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC009464.1-201ENST00000615731 469 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC068137.4-201ENST00000638485 296 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 AC073869.10-201ENST00000642016 354 ntBASIC6.58□□□□□ -1.36
SYNE4Q8N205 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SYNE4Q8N205 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.58□□□□□ -1.36
SYNE4Q8N205 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 RNU6-670P-201ENST00000364312 104 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 RNA5SP87-201ENST00000384155 118 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 SNORD56.6-201ENST00000384569 71 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 MIR7-1-201ENST00000384871 110 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 MIR192-201ENST00000384915 110 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 MIR1182-201ENST00000408363 97 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC008072.1-201ENST00000434254 824 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 RN7SL188P-201ENST00000469842 285 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 RN7SKP5-201ENST00000517045 272 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 SS18L2P2-201ENST00000583960 235 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC005252.1-201ENST00000604518 1063 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC009597.2-201ENST00000604659 592 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC064807.4-201ENST00000607201 407 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AP003400.3-201ENST00000624904 346 ntBASIC6.57□□□□□ -1.36
SYNE4Q8N205 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms