Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 THAP12P5-201ENST00000405864 2275 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 TMSB4XP2-201ENST00000335179 210 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 RNU5B-4P-201ENST00000363508 111 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 SNORD56.4-201ENST00000363883 71 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL009179.1-201ENST00000406085 265 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 RPS3AP25-201ENST00000411660 793 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL590806.1-201ENST00000415818 853 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL022331.1-201ENST00000429025 477 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC023512.1-201ENST00000444513 499 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC069540.1-201ENST00000446320 988 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL596266.1-201ENST00000448132 400 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 CALM1P2-201ENST00000452941 448 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC025459.1-201ENST00000504072 156 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC091912.1-201ENST00000511351 248 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AP000648.1-201ENST00000529682 397 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC087888.1-201ENST00000550884 1254 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 CYCSP38-201ENST00000559840 322 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC026826.3-201ENST00000561747 158 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 BNIP3P38-201ENST00000601117 544 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC009237.13-201ENST00000603193 276 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC099785.1-201ENST00000605697 437 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL031601.1-201ENST00000605702 394 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL359513.1-201ENST00000614364 557 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL158062.1-201ENST00000619632 745 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 uc_338.7-201ENST00000621834 124 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC129778.1-202ENST00000623812 261 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AL591379.1-207ENST00000635982 261 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC090181.3-201ENST00000624777 1514 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHFQ7M4L6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHFQ7M4L6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHFQ7M4L6 AC073136.1-201ENST00000449426 2884 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 MT-RNR2-201ENST00000387347 1559 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 ADAM5-202ENST00000399789 1942 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC100757.1-201ENST00000616872 1835 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 RNA5SP30-201ENST00000365552 115 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHFQ7M4L6 RNU6-298P-201ENST00000390888 96 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 RNA5SP241-201ENST00000391326 114 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 CHMP1B2P-201ENST00000399581 597 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC010385.1-201ENST00000412374 256 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 UBE2V1P9-201ENST00000414760 368 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC008173.1-201ENST00000418901 264 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL035660.1-201ENST00000422041 222 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC092447.2-201ENST00000435487 669 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 FABP5P3-201ENST00000437960 408 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AMYP1-201ENST00000440059 1023 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL009048.1-201ENST00000450437 298 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 CYCSP42-201ENST00000450823 238 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC118758.1-202ENST00000454719 225 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.96□□□□□ -1.62
SHFQ7M4L6 RN7SL583P-201ENST00000475692 287 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 AC022215.1-201ENST00000481770 362 ntBASIC4.96□□□□□ -1.62
SHFQ7M4L6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms