Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 ICE2P1-201ENST00000512800 1849 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 MAPK10-349ENST00000641767 3661 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 OR13Z1P-201ENST00000416141 834 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 DHFRP3-201ENST00000455595 559 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC079804.1-201ENST00000461922 436 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 MIR6133-201ENST00000617057 108 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC015722.2-201ENST00000622210 551 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC109446.4-201ENST00000623235 2755 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 SNORA9-201ENST00000384215 133 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 AC093578.1-201ENST00000415219 368 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 AC011998.1-201ENST00000433403 117 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 IGBP1P4-201ENST00000503202 879 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 RNA5SP372-201ENST00000390836 115 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.84□□□□□ -1.79
VPS13CQ709C8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS13CQ709C8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
VPS13CQ709C8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 RNU6-628P-201ENST00000410675 107 ntBASIC3.84□□□□□ -1.8
VPS13CQ709C8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.8
VPS13CQ709C8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS13CQ709C8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS13CQ709C8 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS13CQ709C8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.84□□□□□ -1.8
VPS13CQ709C8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC097374.1-203ENST00000400783 485 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC073052.1-201ENST00000440417 714 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC011471.1-201ENST00000585766 187 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 BNIP3P19-201ENST00000605397 577 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 MFSD8-236ENST00000641509 4050 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 RN7SL517P-201ENST00000462240 305 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AP001267.4-201ENST00000602598 545 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AL121772.2-201ENST00000614331 297 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms