Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC008507.1-201ENST00000587506 734 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AL359704.2-201ENST00000604335 521 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC127502.3-201ENST00000636170 1206 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 LRRC77P-213ENST00000637727 880 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC024614.3-201ENST00000637860 256 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 QRSL1P1-201ENST00000400977 1540 ntBASIC6.9□□□□□ -1.31
RNF43Q68DV7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.9□□□□□ -1.31
RNF43Q68DV7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF43Q68DV7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 PPIAP24-201ENST00000328558 471 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 Y_RNA.162-201ENST00000363683 102 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 SNORA70H-201ENST00000383910 135 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 SNORA70J-201ENST00000384182 135 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 CYCSP17-201ENST00000407870 315 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AL663061.1-201ENST00000416625 580 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 Z99497.1-201ENST00000421282 135 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 PNRC2P1-201ENST00000423940 420 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 RPL7AP23-201ENST00000482625 776 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 HSPE1P23-201ENST00000509838 286 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC106872.4-201ENST00000510050 523 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 MTND3P22-201ENST00000510932 243 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 TCP11X3P-202ENST00000514289 1254 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC011352.2-201ENST00000514574 1016 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AP000619.3-201ENST00000535634 1127 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 OR11J2P-201ENST00000555298 907 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC026956.1-201ENST00000558741 396 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC002519.2-203ENST00000567043 837 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC012254.4-201ENST00000588843 273 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 BNIP3P9-201ENST00000603714 553 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AL049840.6-201ENST00000604583 345 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC018714.1-201ENST00000605028 208 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC011472.4-201ENST00000615848 491 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 AP000577.1-201ENST00000624366 878 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 MTND5P23-201ENST00000430812 1655 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AP000776.1-201ENST00000530032 1663 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 AL137918.1-201ENST00000624542 1922 ntBASIC6.89□□□□□ -1.31
RNF43Q68DV7 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF43Q68DV7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF43Q68DV7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 MTCO1P18-201ENST00000455518 1419 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AL359715.4-201ENST00000606629 1436 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms