Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 AL049779.3-201ENST00000557141 606 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC024267.2-201ENST00000582737 417 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC020634.1-201ENST00000608701 549 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 AC015914.2-201ENST00000618167 288 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 AL137067.2-201ENST00000621202 131 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 MIR6503-201ENST00000622884 86 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 AL133243.2-201ENST00000610331 1621 ntBASIC2.75□□□□□ -1.97
LINC01554Q52M75 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LINC01554Q52M75 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
LINC01554Q52M75 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 EIF2AP4-201ENST00000424793 1781 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL353743.4-201ENST00000422653 1547 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 RPL11P4-201ENST00000332269 436 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 RNU1-108P-201ENST00000362556 161 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 HIST1H3PS1-201ENST00000404612 417 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL138878.1-201ENST00000405131 347 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 RN7SKP91-201ENST00000410852 288 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC007738.1-201ENST00000413892 348 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 PCNPP4-201ENST00000414817 517 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC007064.3-201ENST00000422608 359 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 OSTCP4-201ENST00000424397 449 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 CCNB1IP1P1-201ENST00000428976 839 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 MED28P4-201ENST00000433137 572 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC010086.1-201ENST00000437359 1052 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 PPIAP10-201ENST00000438675 458 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 CUBNP2-201ENST00000443534 1139 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 GAPDHP23-201ENST00000444823 993 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 COX4I1P2-201ENST00000447446 547 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01554Q52M75 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 PRPF38AP1-201ENST00000451976 933 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL133477.1-201ENST00000457472 514 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AL445433.1-201ENST00000457507 257 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 RNU1-88P-201ENST00000459274 128 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 TFP1-201ENST00000460564 572 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 RN7SL39P-201ENST00000462264 297 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC006967.1-201ENST00000467608 589 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 AP002884.1-201ENST00000479691 655 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 TFP1-203ENST00000490470 561 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC083795.1-201ENST00000491760 320 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 RPL5P23-201ENST00000496040 868 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 FTH1P24-201ENST00000503502 462 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 FGB-207ENST00000509493 1164 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 RPL7L1P7-201ENST00000509986 724 ntBASIC2.74□□□□□ -1.97
LINC01554Q52M75 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01554Q52M75 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms