Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 MAPK10-303ENST00000641324 3959 ntBASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC58Q4VC31 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 DHX9P1-201ENST00000436565 3076 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 NUDT19P3-201ENST00000404698 555 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 RPL23AP48-201ENST00000406913 488 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 FABP7P2-201ENST00000429946 379 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 MRPL48P1-201ENST00000445390 636 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 RPL9P15-201ENST00000491096 532 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 RPEP1-201ENST00000504507 658 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC018442.3-201ENST00000523025 183 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC010547.6-201ENST00000571789 193 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC090312.1-201ENST00000580637 348 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC108865.2-201ENST00000606881 432 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC097505.1-201ENST00000610199 565 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AL121873.1-201ENST00000616013 524 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 AC025262.3-201ENST00000623666 360 ntBASIC4.5□□□□□ -1.69
CCDC58Q4VC31 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC58Q4VC31 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 U3.3-201ENST00000362986 216 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 RNA5SP335-201ENST00000363817 110 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 SNORA2.3-201ENST00000383920 135 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 HSPD1P16-201ENST00000402302 394 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AP000580.1-201ENST00000404439 358 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 ARL4AP3-201ENST00000441452 574 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AL117692.1-201ENST00000494283 713 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AP002981.1-201ENST00000517692 975 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC107958.1-201ENST00000556576 290 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 RBM22P1-201ENST00000578589 1214 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC015813.4-201ENST00000610469 179 ntBASIC4.49□□□□□ -1.69
CCDC58Q4VC31 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC58Q4VC31 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms